RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 Q6ZR03 302 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 DOK3Q7L591 496 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 PRRC1Q96M27 445 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 POLE4Q9NR33 117 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 TUBG2Q9NRH3 451 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 ZNF69Q9UC07 566 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 NUP50Q9UKX7 468 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 NDRG4Q9ULP0 352 aaKnown RBP13.44□□□□□ -0.26
SCFD1-224ENST00000557713 AUP1Q9Y679 476 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 MGAM2Q2M2H8 2515 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 A6NIZ1 184 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 TMPRSS2O15393 492 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 KCNAB3O43448 404 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 KITLGP21583 273 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 PRTN3P24158 256 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 RAP1BP61224 184 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 SEC61A1P61619 476 aaKnown RBP13.43□□□□□ -0.26
SCFD1-224ENST00000557713 RAP1AP62834 184 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 PRKCDQ05655 676 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 ANKDD1AQ495B1 522 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 PRR31Q5SQ13 230 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 SHISA2Q6UWI4 295 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 RBMS3Q6XE24 437 aaKnown RBP13.43□□□□□ -0.26
SCFD1-224ENST00000557713 KLHL36Q8N4N3 616 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 SPICQ8N5J4 248 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 NPEPL1Q8NDH3 523 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 OR51A7Q8NH64 312 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 TPD52L3Q96J77 140 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 SIGLEC11Q96RL6 698 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 GPA33Q99795 319 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 C1QTNF5Q9BXJ0 243 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 EMC7Q9NPA0 242 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 MAN2C1Q9NTJ4 1040 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 PLEK2Q9NYT0 353 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 STARD10Q9Y365 291 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 INSIG2Q9Y5U4 225 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 WNK2Q9Y3S1 2297 aa13.43□□□□□ -0.26
SCFD1-224ENST00000557713 TRAV27A0A087WT01 109 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 A8MXK9 166 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 HMGB1P1B2RPK0 211 aaPredicted RBP13.42□□□□□ -0.26
SCFD1-224ENST00000557713 F5H0A9 414 aaPredicted RBP13.42□□□□□ -0.26
SCFD1-224ENST00000557713 MRASO14807 208 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 ABHD16AO95870 558 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 TNFRSF1AP19438 455 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 GSTM3P21266 225 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 TNFSF4P23510 183 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 ZMYND11Q15326 602 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 LRRC23Q53EV4 343 aaPredicted RBP13.42□□□□□ -0.26
SCFD1-224ENST00000557713 ARMCX4Q5H9R4 360 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 OAFQ86UD1 273 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 NRMQ8IXM6 262 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 MICU2Q8IYU8 434 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 BCL6BQ8N143 479 aaPredicted RBP13.42□□□□□ -0.26
SCFD1-224ENST00000557713 OR2Z1Q8NG97 314 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 HAVCR1Q96D42 359 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 CMBLQ96DG6 245 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 C1orf147Q96MC9 270 aaPredicted RBP13.42□□□□□ -0.26
SCFD1-224ENST00000557713 TMEM120AQ9BXJ8 343 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 ZNF696Q9H7X3 374 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 RHCGQ9UBD6 479 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 IL19Q9UHD0 177 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 SNX13Q9Y5W8 968 aa13.42□□□□□ -0.26
SCFD1-224ENST00000557713 EFCAB9A8MZ26 197 aa13.41□□□□□ -0.26
SCFD1-224ENST00000557713 FAM220BPB1ANY3 271 aa13.41□□□□□ -0.26
SCFD1-224ENST00000557713 H7C1C5 153 aa13.41□□□□□ -0.26
SCFD1-224ENST00000557713 FFAR1O14842 300 aa13.41□□□□□ -0.26
SCFD1-224ENST00000557713 IFNA8P32881 189 aa13.41□□□□□ -0.26
SCFD1-224ENST00000557713 YAP1P46937 504 aaKnown RBP13.41□□□□□ -0.26
SCFD1-224ENST00000557713 SLC9A3P48764 834 aa13.41□□□□□ -0.26
SCFD1-224ENST00000557713 BTG1P62324 171 aa13.41□□□□□ -0.26
SCFD1-224ENST00000557713 LCN6P62502 163 aa13.41□□□□□ -0.26
SCFD1-224ENST00000557713 KLF10Q13118 480 aa13.41□□□□□ -0.26
SCFD1-224ENST00000557713 VASH1Q7L8A9 365 aaPredicted RBP13.41□□□□□ -0.26
SCFD1-224ENST00000557713 RNF113BQ8IZP6 322 aaKnown RBP13.41□□□□□ -0.26
SCFD1-224ENST00000557713 OFCC1Q8IZS5 231 aa13.41□□□□□ -0.26
SCFD1-224ENST00000557713 FAM156AQ8NDB6 213 aa13.41□□□□□ -0.26
SCFD1-224ENST00000557713 PTP4A1Q93096 173 aa13.41□□□□□ -0.26
SCFD1-224ENST00000557713 ZNF48Q96MX3 618 aaPredicted RBP13.41□□□□□ -0.26
SCFD1-224ENST00000557713 ZMAT3Q9HA38 289 aaKnown RBP13.41□□□□□ -0.26
SCFD1-224ENST00000557713 PPP1R3CQ9UQK1 317 aa13.41□□□□□ -0.26
SCFD1-224ENST00000557713 DNAJC9-AS1A6NH13 148 aa13.4□□□□□ -0.26
SCFD1-224ENST00000557713 BBIP1A8MTZ0 92 aa13.4□□□□□ -0.26
SCFD1-224ENST00000557713 J3KTA2 159 aa13.4□□□□□ -0.26
SCFD1-224ENST00000557713 SGCEO43556 437 aa13.4□□□□□ -0.26
SCFD1-224ENST00000557713 AHCYL1O43865 530 aa13.4□□□□□ -0.26
SCFD1-224ENST00000557713 ZNF26P17031 533 aaPredicted RBP13.4□□□□□ -0.26
SCFD1-224ENST00000557713 HTR5AP47898 357 aa13.4□□□□□ -0.26
SCFD1-224ENST00000557713 PAX8Q06710 450 aa13.4□□□□□ -0.26
SCFD1-224ENST00000557713 SCRN3Q0VDG4 424 aa13.4□□□□□ -0.26
SCFD1-224ENST00000557713 TRAM2Q15035 370 aa13.4□□□□□ -0.26
SCFD1-224ENST00000557713 OR2T12Q8NG77 320 aa13.4□□□□□ -0.26
SCFD1-224ENST00000557713 OR13C2Q8NGS9 318 aa13.4□□□□□ -0.26
SCFD1-224ENST00000557713 ITLN1Q8WWA0 313 aa13.4□□□□□ -0.26
SCFD1-224ENST00000557713 DUX5Q96PT3 197 aa13.4□□□□□ -0.26
SCFD1-224ENST00000557713 FNDC11Q9BVV2 318 aa13.4□□□□□ -0.26
SCFD1-224ENST00000557713 GRHPRQ9UBQ7 328 aa13.4□□□□□ -0.26
SCFD1-224ENST00000557713 ADAM18Q9Y3Q7 739 aa13.4□□□□□ -0.26
SCFD1-224ENST00000557713 A0A087WUU8 490 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 LOC100653049A0A140TA62 436 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 ELOVL7A1L3X0 281 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms