RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 CD40LGP29965 261 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 ETV6P41212 452 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 KIR3DL2P43630 455 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 RNPS1Q15287 305 aaKnown RBP11.03□□□□□ -0.64
SHMT2-233ENST00000557529 SGCAQ16586 387 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 SPANXN2Q5MJ10 180 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 MZT2AQ6P582 158 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 C16orf87Q6PH81 154 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 CORO6Q6QEF8 472 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 PRSS35Q8N3Z0 413 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 CPT1CQ8TCG5 803 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 ACOT12Q8WYK0 555 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 RGP1Q92546 391 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-233ENST00000557529 KCTD12Q96CX2 325 aaKnown RBP11.03□□□□□ -0.64
SHMT2-233ENST00000557529 WDFY2Q96P53 400 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 PPIL3Q9H2H8 161 aaKnown RBP11.03□□□□□ -0.64
SHMT2-233ENST00000557529 SLC24A3Q9HC58 644 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 WASF3Q9UPY6 502 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 B3GNT3Q9Y2A9 372 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 SSUH2Q9Y2M2 353 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 NOSIPQ9Y314 301 aaKnown RBP11.03□□□□□ -0.64
SHMT2-233ENST00000557529 CMAHPQ9Y471 501 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 LOC110117498-PIK3R3F6TDL0 507 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 J3QRK9 145 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 CTDSP2O14595 271 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 MRPL33O75394 65 aaKnown RBP11.03□□□□□ -0.64
SHMT2-233ENST00000557529 SRSF10O75494 262 aaKnown RBP11.03□□□□□ -0.64
SHMT2-233ENST00000557529 WNT11O96014 354 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 RAF1P04049 648 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 OCM2P0CE71 109 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 RAB3BP20337 219 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 MMP16P51512 607 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 PPP5CP53041 499 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 PMP22Q01453 160 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 ZNF169Q14929 603 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-233ENST00000557529 TAF13Q15543 124 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 STK11Q15831 433 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 FAM27D1Q5T7N8 215 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 DDI2Q5TDH0 399 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 ZNF704Q6ZNC4 412 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-233ENST00000557529 CCDC190Q86UF4 302 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 MCEMP1Q8IX19 187 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 GJC3Q8NFK1 279 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 IL17RDQ8NFM7 739 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 ZNF775Q96BV0 537 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-233ENST00000557529 WDYHV1Q96HA8 205 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 DERL3Q96Q80 235 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 ZNF416Q9BWM5 594 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 LINC00470Q9BZP3 86 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 SLITRK2Q9H156 845 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 MOB1AQ9H8S9 216 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 BCO1Q9HAY6 547 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 GP6Q9HCN6 339 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 NOX4Q9NPH5 578 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 SPRR3Q9UBC9 169 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 ASH2LQ9UBL3 628 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 GTF2A1LQ9UNN4 478 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 ZNF175Q9Y473 711 aa11.03□□□□□ -0.64
SHMT2-233ENST00000557529 DMXL1Q9Y485 3027 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 A0A1B0GTH9 108 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 A0A1B0GVC2 190 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 TMEM269A0A1B0GVZ9 245 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 SMIM30A4D0T7 59 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 ANKRD61A6NGH8 418 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 TMEM127O75204 238 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 PNPP00491 289 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 FCGR2AP12318 317 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 SRMP19623 302 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 TNFSF8P32971 234 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 NTF4P34130 210 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 CAV3P56539 151 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 GRB2P62993 217 aaKnown RBP11.02□□□□□ -0.65
SHMT2-233ENST00000557529 PPP3R1P63098 170 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 MFGE8Q08431 387 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-233ENST00000557529 BCL2L15Q5TBC7 163 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 FAM27BQ5VT28 67 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 CFAP77Q6ZQR2 320 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 OR10S1Q8NGN2 331 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 FNDC9Q8TBE3 224 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 NABP1Q96AH0 204 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 ATF6BQ99941 703 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 SLC30A2Q9BRI3 323 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 SLCO5A1Q9H2Y9 848 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 CRLF2Q9HC73 371 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 TMEM38BQ9NVV0 291 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 DKK4Q9UBT3 224 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 OR52A1Q9UKL2 312 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 FBXL3Q9UKT7 428 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 CAMK2AQ9UQM7 478 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 SLC22A13Q9Y226 551 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 EMC9Q9Y3B6 208 aa11.02□□□□□ -0.65
SHMT2-233ENST00000557529 TRBV5-7A0A0A0MS05 114 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 A0A1W2PPK0 400 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 ACOD1A6NK06 481 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 NOTOA8MTQ0 251 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 MKRN2OSH3BPM6 223 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 AQP7O14520 342 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 PIN1P1O15428 100 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 KRT33AO76009 404 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 NCR1O76036 304 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms