RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 MSH4O15457 936 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 NDUFS6O75380 124 aaKnown RBP3.41□□□□□ -1.86
PRPF39-212ENST00000557477 ECI2O75521 394 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 CCNKO75909 580 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 DCTN3O75935 186 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 OR7A10O76100 309 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 DHFRP00374 187 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 GPR89BP0CG08 455 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 PSMC3P17980 439 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 SERPINA2P20848 420 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 F8A1P23610 371 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 ADORA2BP29275 332 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 YWHABP31946 246 aaKnown RBP3.41□□□□□ -1.86
PRPF39-212ENST00000557477 DHPSP49366 369 aaPredicted RBP3.41□□□□□ -1.86
PRPF39-212ENST00000557477 PPT1P50897 306 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 PSMD4P55036 377 aaKnown RBP3.41□□□□□ -1.86
PRPF39-212ENST00000557477 NUP107P57740 925 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 SPCS3P61009 180 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 ACTR1AP61163 376 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 RPL26P61254 145 aaKnown RBP3.41□□□□□ -1.86
PRPF39-212ENST00000557477 NCALDP61601 193 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 RPL32P62910 135 aaKnown RBP3.41□□□□□ -1.86
PRPF39-212ENST00000557477 IFITM2Q01629 132 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 LAMTOR4Q0VGL1 99 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 PMS2P3Q13401 168 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 KYAT1Q16773 422 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 DUSP7Q16829 419 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 LRRC36Q1X8D7 754 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 DNAL1Q4LDG9 190 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 TNFAIP8L3Q5GJ75 292 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 TEX30Q5JUR7 227 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 C10orf120Q5SQS8 335 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 ATF7IP2Q5U623 682 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 RESP18Q5W5W9 173 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 FAM71F2Q6NXP2 309 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 Q6ZS52 159 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 TPGS1Q6ZTW0 290 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 FRA10AC1Q70Z53 315 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 GPD1LQ8N335 351 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 CLDN19Q8N6F1 224 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 ALLCQ8N6M5 410 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 ZNF525Q8N782 197 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 SNX31Q8N9S9 440 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 OR13F1Q8NGS4 319 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 SETD7Q8WTS6 366 aaKnown RBP3.41□□□□□ -1.86
PRPF39-212ENST00000557477 CAPSLQ8WWF8 208 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 TCEAL3Q969E4 200 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 ELSPBP1Q96BH3 223 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 TAMM41Q96BW9 452 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 CELF6Q96J87 481 aaKnown RBP3.41□□□□□ -1.86
PRPF39-212ENST00000557477 SERPINB12Q96P63 405 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 SEC22CQ9BRL7 303 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 LXNQ9BS40 222 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 BCL2L14Q9BZR8 327 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 GLIPR2Q9H4G4 154 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 TMEM9BQ9NQ34 198 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 ZNF275Q9NSD4 429 aaPredicted RBP3.41□□□□□ -1.86
PRPF39-212ENST00000557477 CMTM6Q9NX76 183 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 SMPD3Q9NY59 655 aaPredicted RBP3.41□□□□□ -1.86
PRPF39-212ENST00000557477 SIGLEC8Q9NYZ4 499 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 PRELID3BQ9Y3B1 194 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 PATJQ8NI35 1801 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 C2orf16Q68DN1 1984 aa3.41□□□□□ -1.86
PRPF39-212ENST00000557477 DMDP11532 3685 aa3.4□□□□□ -1.86
PRPF39-212ENST00000557477 IGLV8-61A0A075B6I0 122 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 IGLV3-22A0A075B6J6 115 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 LOC100506127A0A0U1RQW1 187 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 ZNF233A6NK53 670 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 SIGLEC16A6NMB1 481 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 PP2D1A8MPX8 630 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 ZNF705EA8MWA4 302 aaPredicted RBP3.4□□□□□ -1.87
PRPF39-212ENST00000557477 TCP11X1B4DZS4 312 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 K7ERQ8 282 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 ACACBO00763 2458 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 OR7A17O14581 309 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 GPR171O14626 319 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 DNALI1O14645 258 aaPredicted RBP3.4□□□□□ -1.87
PRPF39-212ENST00000557477 MTX2O75431 263 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 SPAG6O75602 509 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 CBR3O75828 277 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 MYO1DO94832 1006 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 RHOBTB1O94844 696 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 CDK14O94921 469 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 TDP2O95551 362 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 PLEKP08567 350 aaPredicted RBP3.4□□□□□ -1.87
PRPF39-212ENST00000557477 NCF2P19878 526 aaPredicted RBP3.4□□□□□ -1.87
PRPF39-212ENST00000557477 GALP22466 123 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 HOXA9P31269 272 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 CCR1P32246 355 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 CD80P33681 288 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 QARSP47897 775 aaKnown RBP3.4□□□□□ -1.87
PRPF39-212ENST00000557477 RPL29P47914 159 aaKnown RBP3.4□□□□□ -1.87
PRPF39-212ENST00000557477 ERFP50548 548 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 CDH6P55285 790 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 KCNJ2P63252 427 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 GLO1Q04760 184 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 CKAP4Q07065 602 aaKnown RBP3.4□□□□□ -1.87
PRPF39-212ENST00000557477 TWF1Q12792 350 aa3.4□□□□□ -1.87
PRPF39-212ENST00000557477 BAMBIQ13145 260 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms