RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ENPP4Q9Y6X5 453 aa12.04□□□□□ -0.48
SNX6-210ENST00000557341 NBEAL1Q6ZS30 2694 aa12.04□□□□□ -0.48
SNX6-210ENST00000557341 DOCK11Q5JSL3 2073 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 A0A0G2JMP0 313 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 TEX13CA0A0J9YWL9 993 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 A0A0X1KG70 313 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 PRSS37A4D1T9 235 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 TIMM8AO60220 97 aaPredicted RBP12.03□□□□□ -0.48
SNX6-210ENST00000557341 DEAF1O75398 565 aaPredicted RBP12.03□□□□□ -0.48
SNX6-210ENST00000557341 NGFP01138 241 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 COX5BP10606 129 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 NCK1P16333 377 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 GSTM3P21266 225 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 MDH1P40925 334 aaKnown RBP12.03□□□□□ -0.48
SNX6-210ENST00000557341 HTR5AP47898 357 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 SLC3A1Q07837 685 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 KRR1Q13601 381 aaKnown RBP12.03□□□□□ -0.48
SNX6-210ENST00000557341 FGD3Q5JSP0 725 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 FAHD2BQ6P2I3 314 aaPredicted RBP12.03□□□□□ -0.48
SNX6-210ENST00000557341 TBPL2Q6SJ96 375 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 TREML1Q86YW5 311 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 OR4M2Q8NGB6 313 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 SLC7A13Q8TCU3 470 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 CCL17Q92583 94 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 FAHD2AQ96GK7 314 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 FAM46AQ96IP4 442 aaKnown RBP12.03□□□□□ -0.48
SNX6-210ENST00000557341 GAL3ST1Q99999 423 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 EMC7Q9NPA0 242 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 KRCC1Q9NPI7 259 aaPredicted RBP12.03□□□□□ -0.48
SNX6-210ENST00000557341 G6PC2Q9NQR9 355 aa12.03□□□□□ -0.48
SNX6-210ENST00000557341 A0A1W2PRQ8 180 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 ISPDA4D126 451 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 SGCEO43556 437 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 UBOX5O94941 541 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 NDUFB2O95178 105 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 SCG5P05408 212 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 H1F0P07305 194 aaKnown RBP12.02□□□□□ -0.49
SNX6-210ENST00000557341 CD55P08174 381 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 CTLA4P16410 223 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 ZNF26P17031 533 aaPredicted RBP12.02□□□□□ -0.49
SNX6-210ENST00000557341 SDHAP31040 664 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 AQP6Q13520 282 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 DGCR6Q14129 220 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 MTX3Q5HYI7 312 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 THSD4Q6ZMP0 1018 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 PEG10Q86TG7 708 aaKnown RBP12.02□□□□□ -0.49
SNX6-210ENST00000557341 SEMA6DQ8NFY4 1073 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 RASD2Q96D21 266 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 CMTM5Q96DZ9 223 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 GPX7Q96SL4 187 aaPredicted RBP12.02□□□□□ -0.49
SNX6-210ENST00000557341 MSL2Q9HCI7 577 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 SPAG4Q9NPE6 437 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 TBCCD1Q9NVR7 557 aa12.02□□□□□ -0.49
SNX6-210ENST00000557341 SAMD4AQ9UPU9 718 aaKnown RBP12.02□□□□□ -0.49
SNX6-210ENST00000557341 FAM32AQ9Y421 112 aaKnown RBP12.02□□□□□ -0.49
SNX6-210ENST00000557341 LOC105371242A0A075B767 164 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 PLPP2O43688 288 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 EPHA1P21709 976 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 TUBG1P23258 451 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 LIMS1P48059 325 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 TNFAIP6P98066 277 aaPredicted RBP12.01□□□□□ -0.49
SNX6-210ENST00000557341 PSG7Q13046 419 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 DCAF12L2Q5VW00 463 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 GPR139Q6DWJ6 353 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 VASH1Q7L8A9 365 aaPredicted RBP12.01□□□□□ -0.49
SNX6-210ENST00000557341 ADCK1Q86TW2 530 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 ZNF418Q8TF45 676 aaPredicted RBP12.01□□□□□ -0.49
SNX6-210ENST00000557341 ZFAND2BQ8WV99 257 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 RSRC1Q96IZ7 334 aaKnown RBP12.01□□□□□ -0.49
SNX6-210ENST00000557341 COG8Q96MW5 612 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 SYT4Q9H2B2 425 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 NRIP3Q9NQ35 241 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 TUBG2Q9NRH3 451 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 PLEK2Q9NYT0 353 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 EGFL7Q9UHF1 273 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 KLHL21Q9UJP4 597 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 SIGLEC7Q9Y286 467 aa12.01□□□□□ -0.49
SNX6-210ENST00000557341 J3QLI3 93 aa12□□□□□ -0.49
SNX6-210ENST00000557341 SOCS2O14508 198 aa12□□□□□ -0.49
SNX6-210ENST00000557341 SLC16A7O60669 478 aa12□□□□□ -0.49
SNX6-210ENST00000557341 VENTXO95231 258 aa12□□□□□ -0.49
SNX6-210ENST00000557341 RHCEP18577 417 aa12□□□□□ -0.49
SNX6-210ENST00000557341 TNFSF4P23510 183 aa12□□□□□ -0.49
SNX6-210ENST00000557341 GATA3P23771 443 aa12□□□□□ -0.49
SNX6-210ENST00000557341 OMPP47874 163 aa12□□□□□ -0.49
SNX6-210ENST00000557341 PSME3P61289 254 aa12□□□□□ -0.49
SNX6-210ENST00000557341 TSEN54Q7Z6J9 526 aaKnown RBP12□□□□□ -0.49
SNX6-210ENST00000557341 GLB1L2Q8IW92 636 aa12□□□□□ -0.49
SNX6-210ENST00000557341 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12□□□□□ -0.49
SNX6-210ENST00000557341 TMPRSS13Q9BYE2 586 aa12□□□□□ -0.49
SNX6-210ENST00000557341 RERGLQ9H628 205 aa12□□□□□ -0.49
SNX6-210ENST00000557341 UBAP1Q9NZ09 502 aa12□□□□□ -0.49
SNX6-210ENST00000557341 NDUFAF4Q9P032 175 aa12□□□□□ -0.49
SNX6-210ENST00000557341 ASH2LQ9UBL3 628 aa12□□□□□ -0.49
SNX6-210ENST00000557341 ATPIF1Q9UII2 106 aa12□□□□□ -0.49
SNX6-210ENST00000557341 PURGQ9UJV8 347 aaKnown RBP12□□□□□ -0.49
SNX6-210ENST00000557341 AURKCQ9UQB9 309 aa12□□□□□ -0.49
SNX6-210ENST00000557341 GMNNO75496 209 aa11.99□□□□□ -0.49
SNX6-210ENST00000557341 KHDRBS3O75525 346 aaKnown RBP11.99□□□□□ -0.49
SNX6-210ENST00000557341 TNFRSF1AP19438 455 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms