RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 ERVS71-1P61550 626 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 GNB2P62879 340 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 DR1Q01658 176 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 COX10Q12887 443 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 C1DQ13901 141 aaKnown RBP3.86□□□□□ -1.79
SCFD1-223ENST00000557076 MFSD13AQ14CX5 517 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 IMPG1Q17R60 797 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 PHYHD1Q5SRE7 291 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 C1orf140Q5VVS0 124 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 TYW3Q6IPR3 259 aaKnown RBP3.86□□□□□ -1.79
SCFD1-223ENST00000557076 SLC27A4Q6P1M0 643 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 UNQ6126/PRO20091Q6UXV3 157 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 NHLRC1Q6VVB1 395 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 NET1Q7Z628 596 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-223ENST00000557076 NDUFA11Q86Y39 141 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 KLBQ86Z14 1044 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 SKA3Q8IX90 412 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 TMEM123Q8N131 208 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 KDM8Q8N371 416 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 PAQR4Q8N4S7 273 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-223ENST00000557076 FGFBP3Q8TAT2 258 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 MIPOL1Q8TD10 442 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 SFXN5Q8TD22 340 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 NPRL2Q8WTW4 380 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 C10orf82Q8WW14 230 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 CNOT9Q92600 299 aaKnown RBP3.86□□□□□ -1.79
SCFD1-223ENST00000557076 MOAP1Q96BY2 351 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 COQ8BQ96D53 544 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 R3HDM4Q96D70 268 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 FCRL1Q96LA6 429 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 SIGLEC11Q96RL6 698 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 PRPF18Q99633 342 aaKnown RBP3.86□□□□□ -1.79
SCFD1-223ENST00000557076 CCT7Q99832 543 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 ELAC2Q9BQ52 826 aaKnown RBP3.86□□□□□ -1.79
SCFD1-223ENST00000557076 SLC19A3Q9BZV2 496 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 C1orf198Q9H425 327 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 MTHFD2LQ9H903 347 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-223ENST00000557076 TCF7L2Q9NQB0 619 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 EXD2Q9NVH0 621 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 C1orf109Q9NX04 203 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 DCAF16Q9NXF7 216 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 B3GAT1Q9P2W7 334 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 TBK1Q9UHD2 729 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 BAIAP2L1Q9UHR4 511 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 ATP6V1HQ9UI12 483 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 VPREB3Q9UKI3 123 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 FOXJ3Q9UPW0 622 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 CORO2BQ9UQ03 480 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 SNX24Q9Y343 169 aa3.86□□□□□ -1.79
SCFD1-223ENST00000557076 A0A0U1RQK1 487 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 BTBD17A6NE02 478 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 CLDN24A6NM45 220 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 ZNF879B4DU55 563 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 MS4A18H0YCH9 400 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 ENSAO43768 121 aaKnown RBP3.85□□□□□ -1.79
SCFD1-223ENST00000557076 ANGPTL7O43827 346 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 OR2T1O43869 369 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 PATE4P0C8F1 98 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 PNMTP11086 282 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 LAMP1P11279 417 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 LYL1P12980 280 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 MMP9P14780 707 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 UQCRBP14927 111 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 B4GALT1P15291 398 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 SDC1P18827 310 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 TAC1P20366 129 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 EFNA1P20827 205 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-223ENST00000557076 MALP21145 153 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 TNFSF4P23510 183 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 AHCYP23526 432 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 EPHA3P29320 983 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 ARRB2P32121 409 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 CFHR2P36980 270 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 RPL3P39023 403 aaKnown RBP3.85□□□□□ -1.79
SCFD1-223ENST00000557076 ANP32AP39687 249 aaKnown RBP3.85□□□□□ -1.79
SCFD1-223ENST00000557076 ACAA2P42765 397 aaKnown RBP3.85□□□□□ -1.79
SCFD1-223ENST00000557076 MAGEA4P43358 317 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 PRKAA2P54646 552 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 FOXA1P55317 472 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 NAA20P61599 178 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 TNFAIP6P98066 277 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-223ENST00000557076 EPS8Q12929 822 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 TBC1D28Q2M2D7 210 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 MS4A18Q3C1V0 323 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 NSUN5P1Q3KNT7 163 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 RFTN2Q52LD8 501 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-223ENST00000557076 SPRNQ5BIV9 151 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 XKR7Q5GH72 579 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 CEP78Q5JTW2 689 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 TEX35Q5T0J7 233 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 THEM4Q5T1C6 240 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 AWAT2Q6E213 333 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 WBP2NLQ6ICG8 309 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 H1FNTQ75WM6 255 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-223ENST00000557076 MEPCEQ7L2J0 689 aaKnown RBP3.85□□□□□ -1.79
SCFD1-223ENST00000557076 C16orf62Q7Z3J2 963 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 RNF144BQ7Z419 303 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 C6orf120Q7Z4R8 191 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 SLC22A9Q8IVM8 553 aa3.85□□□□□ -1.79
SCFD1-223ENST00000557076 ZNF440Q8IYI8 595 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms