RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 HOXD1Q9GZZ0 328 aa4.14□□□□□ -1.75
HIF1A-209ENST00000556827 OPN3Q9H1Y3 402 aaPredicted RBP4.14□□□□□ -1.75
HIF1A-209ENST00000556827 MED20Q9H944 212 aa4.14□□□□□ -1.75
HIF1A-209ENST00000556827 PAQR5Q9NXK6 330 aaPredicted RBP4.14□□□□□ -1.75
HIF1A-209ENST00000556827 TAS2R9Q9NYW1 312 aa4.14□□□□□ -1.75
HIF1A-209ENST00000556827 CLCF1Q9UBD9 225 aa4.14□□□□□ -1.75
HIF1A-209ENST00000556827 MCTS1Q9ULC4 181 aaKnown RBP4.14□□□□□ -1.75
HIF1A-209ENST00000556827 SNX6Q9UNH7 406 aa4.14□□□□□ -1.75
HIF1A-209ENST00000556827 NSG2Q9Y328 171 aa4.14□□□□□ -1.75
HIF1A-209ENST00000556827 SNX24Q9Y343 169 aa4.14□□□□□ -1.75
HIF1A-209ENST00000556827 RNF11Q9Y3C5 154 aa4.14□□□□□ -1.75
HIF1A-209ENST00000556827 ZNF175Q9Y473 711 aa4.14□□□□□ -1.75
HIF1A-209ENST00000556827 WIF1Q9Y5W5 379 aa4.14□□□□□ -1.75
HIF1A-209ENST00000556827 AP4B1Q9Y6B7 739 aa4.14□□□□□ -1.75
HIF1A-209ENST00000556827 SELENOKQ9Y6D0 94 aa4.14□□□□□ -1.75
HIF1A-209ENST00000556827 CNTRLQ7Z7A1 2325 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 CSMD2Q7Z408 3487 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 GNG14A0A1W2PPG7 69 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 TCRBV9S1A1TA0A576 114 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 C5orf52A6NGY3 159 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 FAM159BA6NKW6 160 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 E7ESA3 106 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 TLX2O43763 284 aaPredicted RBP4.13□□□□□ -1.75
HIF1A-209ENST00000556827 SELENOFO60613 162 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 SMIM24O75264 130 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 TNFSF13O75888 250 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 PIAS1O75925 651 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 WISP3O95389 354 aaPredicted RBP4.13□□□□□ -1.75
HIF1A-209ENST00000556827 TGM6O95932 706 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 OTCP00480 354 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 KRT6AP02538 564 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 CLPSP04118 112 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 KRT6BP04259 564 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 RBP1P09455 135 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 CT62P0C5K7 136 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 PABPC4LP0CB38 370 aaKnown RBP4.13□□□□□ -1.75
HIF1A-209ENST00000556827 ZNF708P17019 499 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 AADACP22760 399 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 KRT6CP48668 564 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 CLDN18P56856 261 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 LMO4P61968 165 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 CYCSP99999 105 aaKnown RBP4.13□□□□□ -1.75
HIF1A-209ENST00000556827 CAPRIN1Q14444 709 aaKnown RBP4.13□□□□□ -1.75
HIF1A-209ENST00000556827 FASTKD3Q14CZ7 662 aaKnown RBP4.13□□□□□ -1.75
HIF1A-209ENST00000556827 HEPACAMQ14CZ8 416 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 UAP1Q16222 522 aaPredicted RBP4.13□□□□□ -1.75
HIF1A-209ENST00000556827 MOGAT2Q3SYC2 334 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 CHRFAM7AQ494W8 412 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 GLYR1Q49A26 553 aaPredicted RBP4.13□□□□□ -1.75
HIF1A-209ENST00000556827 TRMT12Q53H54 448 aaKnown RBP4.13□□□□□ -1.75
HIF1A-209ENST00000556827 OR5M10Q6IEU7 315 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 FRRS1Q6ZNA5 592 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 ZNF550Q7Z398 422 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 COMMD6Q7Z4G1 85 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 CMC1Q7Z7K0 106 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 Q8NBF4 154 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 STEAP2Q8NFT2 490 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 OR6K3Q8NGY3 331 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 FNDC9Q8TBE3 224 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 SELENOMQ8WWX9 145 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 ZBED6CLQ96FA7 236 aaPredicted RBP4.13□□□□□ -1.75
HIF1A-209ENST00000556827 ALKBH7Q9BT30 221 aaPredicted RBP4.13□□□□□ -1.75
HIF1A-209ENST00000556827 THUMPD3Q9BV44 507 aaKnown RBP4.13□□□□□ -1.75
HIF1A-209ENST00000556827 TBL1XR1Q9BZK7 514 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 SHCBP1LQ9BZQ2 653 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 IQCGQ9H095 443 aaKnown RBP4.13□□□□□ -1.75
HIF1A-209ENST00000556827 RNF122Q9H9V4 155 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 C3orf14Q9HBI5 128 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 B3GAT2Q9NPZ5 323 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 TIGARQ9NQ88 270 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 YAE1D1Q9NRH1 226 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 GLRX2Q9NS18 164 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 FAIMQ9NVQ4 179 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 MAT2BQ9NZL9 334 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 RNF14Q9UBS8 474 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 ABCG2Q9UNQ0 655 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 PLLPQ9Y342 182 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 UTP11Q9Y3A2 253 aaKnown RBP4.13□□□□□ -1.75
HIF1A-209ENST00000556827 SAR1BQ9Y6B6 198 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 CSMD1Q96PZ7 3565 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 NBPF19A0A087WUL8 3843 aa4.13□□□□□ -1.75
HIF1A-209ENST00000556827 PCNX3Q9H6A9 2034 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 MED13LQ71F56 2210 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 TRAV18A0A075B6X5 111 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 A0A087WZ39 114 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 A0A1W2PP18 115 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 A0A1W2PPR1 153 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 GJE1A6NN92 205 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 A8MVM7 634 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 CLOCKO15516 846 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 ST8SIA3O43173 380 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 SCO2O43819 266 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 IDH3BO43837 385 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 KLHL2O95198 593 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 C2P06681 752 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 HPGDP15428 266 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 IL32P24001 234 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 TIA1P31483 386 aaKnown RBP eCLIP4.12□□□□□ -1.756e-7■■■■■ 33.5
HIF1A-209ENST00000556827 EVI2BP34910 448 aa4.12□□□□□ -1.75
HIF1A-209ENST00000556827 PHBP35232 272 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms