RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 POU2F3Q9UKI9 436 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 ITGB1BP2Q9UKP3 347 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 TIMM10BQ9Y5J6 103 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 TLN2Q9Y4G6 2542 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 SETD2Q9BYW2 2564 aaPredicted RBP8.32□□□□□ -1.08
SRP54-210ENST00000556380 A0A1W2PPL8 197 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 TMEM129A0AVI4 362 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 C12orf71A8MTZ7 269 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 G3V2T6 193 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 FAM229AH3BQW9 127 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 SMPD2O60906 423 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 SNAP29O95721 258 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 CCL2P13500 99 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 APEX1P27695 318 aaKnown RBP8.32□□□□□ -1.08
SRP54-210ENST00000556380 NOS3P29474 1203 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 GRK5P34947 590 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 GGT2P36268 569 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 SERPINF1P36955 418 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 GUCA1AP43080 201 aaPredicted RBP8.32□□□□□ -1.08
SRP54-210ENST00000556380 PCBD1P61457 104 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 CDK5Q00535 292 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 HSF2Q03933 536 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 CRMP1Q14194 572 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 GINS1Q14691 196 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 ADIPOQQ15848 244 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 AGAP6Q5VW22 663 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 KDM4DQ6B0I6 523 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 JAZF1Q86VZ6 243 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 HIPK1Q86Z02 1210 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 FBXL14Q8N1E6 418 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 MUC15Q8N387 334 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 PARP8Q8N3A8 854 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 ATG16L2Q8NAA4 619 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 SLC30A7Q8NEW0 376 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 AKR7LQ8NHP1 331 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 DNAJC9Q8WXX5 260 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 PTP4A1Q93096 173 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 PKP2Q99959 881 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 KCNS3Q9BQ31 491 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 KCNN2Q9H2S1 579 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 C1orf198Q9H425 327 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 FN3KQ9H479 309 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 RERGLQ9H628 205 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 RNF121Q9H920 327 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 ZNF556Q9HAH1 456 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 RPRD1BQ9NQG5 326 aaKnown RBP8.32□□□□□ -1.08
SRP54-210ENST00000556380 CMC2Q9NRP2 79 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 CBLN4Q9NTU7 201 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 MRPL22Q9NWU5 206 aaKnown RBP8.32□□□□□ -1.08
SRP54-210ENST00000556380 TMEFF2Q9UIK5 374 aaPredicted RBP8.32□□□□□ -1.08
SRP54-210ENST00000556380 CSPG4Q6UVK1 2322 aa8.32□□□□□ -1.08
SRP54-210ENST00000556380 ARFGEF3Q5TH69 2177 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 OR6C6A6NF89 314 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 FAM171A2A8MVW0 826 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 H3BN98 237 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 GPRIN2O60269 458 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 ICMTO60725 284 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 MITFO75030 526 aaPredicted RBP8.31□□□□□ -1.08
SRP54-210ENST00000556380 PTHP01270 115 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 OR4A8P0C604 315 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 COX5BP10606 129 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 STOMP27105 288 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 PCSK6P29122 969 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 EPHA2P29317 976 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 PYCR1P32322 319 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 GLRXP35754 106 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 PTH2RP49190 550 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 ARHGDIAP52565 204 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 CRISP1P54107 249 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 ADAM8P78325 824 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 TEKQ02763 1124 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 GLO1Q04760 184 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 PLP2Q04941 152 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 SNTB2Q13425 540 aaKnown RBP8.31□□□□□ -1.08
SRP54-210ENST00000556380 DAG1Q14118 895 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 EFNB3Q15768 340 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 MEP1BQ16820 701 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 RSPO1Q2MKA7 263 aaPredicted RBP8.31□□□□□ -1.08
SRP54-210ENST00000556380 CCDC92Q53HC0 331 aaPredicted RBP8.31□□□□□ -1.08
SRP54-210ENST00000556380 LINC01590Q5TEZ4 76 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 KRT80Q6KB66 452 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 ZNF774Q6NX45 483 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 SLC27A4Q6P1M0 643 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 ZFP1Q6P2D0 407 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 DNM1P34Q6PK57 102 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 PRSS57Q6UWY2 283 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 ZDHHC13Q8IUH4 622 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 SVOPLQ8N434 492 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 OR1J2Q8NGS2 313 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 OR2T4Q8NH00 348 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 TEX47Q8TBZ9 253 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 DOK1Q99704 481 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 HCAR1Q9BXC0 346 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 PLK3Q9H4B4 646 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 CXorf56Q9H5V9 222 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 SLC25A19Q9HC21 320 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 CCNB1IP1Q9NPC3 277 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 PAPOLBQ9NRJ5 636 aaKnown RBP8.31□□□□□ -1.08
SRP54-210ENST00000556380 FAIMQ9NVQ4 179 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 CYB5R1Q9UHQ9 305 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms