RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 HSD17B8Q92506 261 aa7.37□□□□□ -1.23
ATXN3-235ENST00000556082 NKD1Q969G9 470 aa7.37□□□□□ -1.23
ATXN3-235ENST00000556082 ABTB1Q969K4 478 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-235ENST00000556082 DNAJA3Q96EY1 480 aa7.37□□□□□ -1.23
ATXN3-235ENST00000556082 THOC3Q96J01 351 aaKnown RBP7.37□□□□□ -1.23
ATXN3-235ENST00000556082 FER1L6-AS2Q96M78 137 aa7.37□□□□□ -1.23
ATXN3-235ENST00000556082 AMELYQ99218 206 aa7.37□□□□□ -1.23
ATXN3-235ENST00000556082 PRRX2Q99811 253 aa7.37□□□□□ -1.23
ATXN3-235ENST00000556082 TTTY10Q9BZA0 68 aa7.37□□□□□ -1.23
ATXN3-235ENST00000556082 OR2B2Q9GZK3 357 aa7.37□□□□□ -1.23
ATXN3-235ENST00000556082 SLITRK2Q9H156 845 aa7.37□□□□□ -1.23
ATXN3-235ENST00000556082 PARD6AQ9NPB6 346 aa7.37□□□□□ -1.23
ATXN3-235ENST00000556082 ABI3Q9P2A4 366 aa7.37□□□□□ -1.23
ATXN3-235ENST00000556082 CYB5R1Q9UHQ9 305 aa7.37□□□□□ -1.23
ATXN3-235ENST00000556082 SPATA2Q9UM82 520 aa7.37□□□□□ -1.23
ATXN3-235ENST00000556082 R4GMQ9 66 aa7.37□□□□□ -1.23
ATXN3-235ENST00000556082 COL6A3P12111 3177 aa7.37□□□□□ -1.23
ATXN3-235ENST00000556082 MPDZO75970 2070 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 hCG_2014768A0A024R1R8 64 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 A0A0J9YW62 118 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 SMIM30A4D0T7 59 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 TRABD2BA6NFA1 517 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 LRRC3CA6NJW4 275 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 IFITM5A6NNB3 132 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 ZNF726A6NNF4 738 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 ZNF814B7Z6K7 855 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 AIPO00170 330 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 PSMD9O00233 223 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 RPP14O95059 124 aaKnown RBP7.36□□□□□ -1.23
ATXN3-235ENST00000556082 CALCBP10092 127 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 RBMS1P29558 406 aaKnown RBP7.36□□□□□ -1.23
ATXN3-235ENST00000556082 NTF4P34130 210 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 SFTPDP35247 375 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 TALDO1P37837 337 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 CD96P40200 585 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 CASRP41180 1078 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 NR4A2P43354 598 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 KIR3DL2P43630 455 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 CLDN6P56747 220 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 CLRN1P58418 232 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 LSM6P62312 80 aaKnown RBP7.36□□□□□ -1.23
ATXN3-235ENST00000556082 FMODQ06828 376 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 FOXO1Q12778 655 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 SLC25A35Q3KQZ1 300 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 PYDC2Q56P42 97 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 WDR38Q5JTN6 314 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 ABHD17BQ5VST6 288 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 HACD4Q5VWC8 232 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 RAET1LQ5VY80 246 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 LRRN1Q6UXK5 716 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 ZNF704Q6ZNC4 412 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-235ENST00000556082 FOXL2NBQ6ZUU3 175 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 CREB3L2Q70SY1 520 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 ZNF554Q86TJ5 538 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 LRRTM1Q86UE6 522 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 ZNF676Q8N7Q3 588 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 C11orf40Q8WZ69 217 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 TMEM54Q969K7 222 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 FAM173AQ9BQD7 235 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 TMEM185BQ9H7F4 350 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 NIPAL2Q9H841 368 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 TIGARQ9NQ88 270 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 C14orf119Q9NWQ9 140 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 TBC1D24Q9ULP9 559 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 BOKQ9UMX3 212 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-235ENST00000556082 U3KQE9 123 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 V9GY05 133 aa7.36□□□□□ -1.23
ATXN3-235ENST00000556082 CPAMD8Q8IZJ3 1885 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 IGKV1D-43A0A0B4J1Z2 117 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 A0A1W2PQ09 198 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 ACOD1A6NK06 481 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 CDRT15L2A8MXV6 281 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 MASP2O00187 686 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 NEURL1O76050 574 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 MPZL1O95297 269 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 PNPP00491 289 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 HPNP05981 417 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 SLC2A2P11168 524 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-235ENST00000556082 ATF1P18846 271 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 CTSSP25774 331 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 PITPNBP48739 271 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 DNASE1L1P49184 302 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 PITPNAQ00169 270 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 KIF26BQ2KJY2 2108 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 HYAL4Q2M3T9 481 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 C10orf128Q5T292 105 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 PYHIN1Q6K0P9 492 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 LRFN4Q6PJG9 635 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 CCBE1Q6UXH8 406 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-235ENST00000556082 STAC2Q6ZMT1 411 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 C22orf34Q6ZV56 151 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 ESPNLQ6ZVH7 1005 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 DCXRQ7Z4W1 244 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 SPACA3Q8IXA5 215 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 Q8N402 240 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 SAMD12Q8N8I0 201 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 OR10H5Q8NGA6 315 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 OR9K2Q8NGE7 335 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 TRMT10AQ8TBZ6 339 aaKnown RBP7.35□□□□□ -1.23
ATXN3-235ENST00000556082 JSRP1Q96MG2 331 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms