RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 HAVCR1Q96D42 359 aa6.6□□□□□ -1.35
PTCSC3-201ENST00000556013 GPX7Q96SL4 187 aaPredicted RBP6.6□□□□□ -1.35
PTCSC3-201ENST00000556013 SUCNR1Q9BXA5 334 aa6.6□□□□□ -1.35
PTCSC3-201ENST00000556013 TMPRSS13Q9BYE2 586 aa6.6□□□□□ -1.35
PTCSC3-201ENST00000556013 NMNAT1Q9HAN9 279 aaPredicted RBP6.6□□□□□ -1.35
PTCSC3-201ENST00000556013 CMTM6Q9NX76 183 aa6.6□□□□□ -1.35
PTCSC3-201ENST00000556013 GRHPRQ9UBQ7 328 aa6.6□□□□□ -1.35
PTCSC3-201ENST00000556013 NBEAL1Q6ZS30 2694 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 TEX13CA0A0J9YWL9 993 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 A0A1W2PRQ8 180 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 PRSS37A4D1T9 235 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 CXCR6O00574 342 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 IMPA2O14732 288 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 SPRY3O43610 288 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 SHOX2O60902 331 aaPredicted RBP6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 KHDRBS3O75525 346 aaKnown RBP6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 NDUFB2O95178 105 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 ABHD16AO95870 558 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 TXNDC12O95881 172 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 NGFP01138 241 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 AVPP01185 164 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 PPIAL4GP0DN37 164 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 RAC2P15153 192 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 RHCEP18577 417 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 EPHA1P21709 976 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 CFPP27918 469 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 CRABP1P29762 137 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 MPV17P39210 176 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 SLC7A2P52569 658 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 LIPEQ05469 1076 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 FMODQ06828 376 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 AQP6Q13520 282 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 DGCR6Q14129 220 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 KCNMB1Q16558 191 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 C8orf82Q6P1X6 216 aaPredicted RBP6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 ZNF730Q6ZMV8 503 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 FKBP9P1Q75LS8 142 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 FAM122BQ7Z309 247 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 LRRC28Q86X40 367 aaPredicted RBP6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 SPICQ8N5J4 248 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 SGMS2Q8NHU3 365 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 POP5Q969H6 163 aaKnown RBP6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 RASD2Q96D21 266 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 GPA33Q99795 319 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 GAL3ST1Q99999 423 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 OR51B6Q9H340 312 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 NARFLQ9H6Q4 476 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 C7orf69Q9H7B7 122 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 PATZ1Q9HBE1 687 aaKnown RBP6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 LPAR2Q9HBW0 351 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 NRIP3Q9NQ35 241 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 TMEM106BQ9NUM4 274 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 FGFR1OP2Q9NVK5 253 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 VSX1Q9NZR4 365 aaPredicted RBP6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 PURGQ9UJV8 347 aaKnown RBP6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 RPS6KA6Q9UK32 745 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 FAM32AQ9Y421 112 aaKnown RBP6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 ENPP4Q9Y6X5 453 aa6.59□□□□□ -1.35
PTCSC3-201ENST00000556013 TRAV27A0A087WT01 109 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 ZSCAN5BA6NJL1 495 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 A8MXK9 166 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 GSTA4O15217 222 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 SGCEO43556 437 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 PIP5K1CO60331 668 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 SASH3O75995 380 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 FSHBP01225 129 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 IGHV2-70P01814 119 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 COX4I1P13073 169 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 SDHAP31040 664 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 RPL4P36578 427 aaKnown RBP6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 SLC6A9P48067 706 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 RPS6KA3P51812 740 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 SMIM11AP58511 58 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 HIST1H3AP68431 136 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 TNFAIP6P98066 277 aaPredicted RBP6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 SRSF2Q01130 221 aaKnown RBP6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 TOP3AQ13472 1001 aaPredicted RBP6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 ZNF181Q2M3W8 571 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 AVPI1Q5T686 147 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 HIST2H3PS2Q5TEC6 136 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 CGB2Q6NT52 195 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 ZNF774Q6NX45 483 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 FBXW12Q6X9E4 464 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 DPY19L2P2Q6ZN68 376 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 RFPL4BQ6ZWI9 263 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 HIST2H3AQ71DI3 136 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 VTCN1Q7Z7D3 282 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 ADCK1Q86TW2 530 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 GLB1L2Q8IW92 636 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 MUC20Q8N307 709 aaPredicted RBP6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 KLHL36Q8N4N3 616 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 GJC3Q8NFK1 279 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 SLC7A13Q8TCU3 470 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 GCDHQ92947 438 aaPredicted RBP6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 ERGIC1Q969X5 290 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 CMBLQ96DG6 245 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 CMTM5Q96DZ9 223 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 Q96M85 177 aa6.58□□□□□ -1.36
PTCSC3-201ENST00000556013 ZMAT3Q9HA38 289 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms