RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.29□□□□□ -1.4
TDP1-213ENST00000555880 KDF1Q8NAX2 398 aaPredicted RBP6.29□□□□□ -1.4
TDP1-213ENST00000555880 TMEM229BQ8NBD8 167 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 CLEC1AQ8NC01 280 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 OR4D10Q8NGI6 311 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 OR52N5Q8NH56 324 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 GPX8Q8TED1 209 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 SCARB1Q8WTV0 552 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.29□□□□□ -1.4
TDP1-213ENST00000555880 RLN3Q8WXF3 142 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 ZNF524Q96C55 264 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 C8orf44Q96CB5 159 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 SLC25A44Q96H78 314 aaPredicted RBP6.29□□□□□ -1.4
TDP1-213ENST00000555880 CNTNAP3BQ96NU0 1288 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 PTDSS2Q9BVG9 487 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 CNTNAP3Q9BZ76 1288 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 ALX4Q9H161 411 aaPredicted RBP6.29□□□□□ -1.4
TDP1-213ENST00000555880 TTYH1Q9H313 450 aaPredicted RBP6.29□□□□□ -1.4
TDP1-213ENST00000555880 POFUT1Q9H488 388 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 MRPL22Q9NWU5 206 aaKnown RBP6.29□□□□□ -1.4
TDP1-213ENST00000555880 SDHAF2Q9NX18 166 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 TAS2R4Q9NYW5 299 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 DHCR7Q9UBM7 475 aaKnown RBP6.29□□□□□ -1.4
TDP1-213ENST00000555880 NPIPA1Q9UND3 350 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 LRP12Q9Y561 859 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 SLCO1B1Q9Y6L6 691 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 R4GMQ9 66 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 FREM3P0C091 2139 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 CPAMD8Q8IZJ3 1885 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 METTL21EPA6NDL7 271 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 ZNF736B4DX44 427 aaPredicted RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 LMO7DNF2Z398 122 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 NUDT21O43809 227 aaKnown RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 NPIPB7O75200 414 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 SIX6O95475 246 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 AMY2AP04746 511 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 MELTFP08582 738 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 ACSM4P0C7M7 580 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 UBCP0CG48 685 aaKnown RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 SRFP11831 508 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 GABRA1P14867 456 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 ZNF250P15622 560 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 ZP3P21754 424 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 ACHEP22303 614 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 AGTR1P30556 359 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 H2BFSP57053 126 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 OC90Q02509 493 aaPredicted RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 MFGE8Q08431 387 aaPredicted RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 FGL1Q08830 312 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 BAMBIQ13145 260 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 MFSD13AQ14CX5 517 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 CLVS2Q5SYC1 327 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 FAM166AQ6J272 317 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 LIN54Q6MZP7 749 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 GSG1LQ6UXU4 331 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 PLXDC1Q8IUK5 500 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 PRSS58Q8IYP2 241 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 GALNT11Q8NCW6 608 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 OR1N1Q8NGS0 311 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 COQ8AQ8NI60 647 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 GPR119Q8TDV5 335 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 ASB5Q8WWX0 329 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 EDAQ92838 391 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 FOXRED1Q96CU9 486 aaPredicted RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 KLHDC3Q9BQ90 382 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 TPSD1Q9BZJ3 242 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 RTN4RQ9BZR6 473 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 PPA2Q9H2U2 334 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 KCNK15Q9H427 330 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 UBE2ZQ9H832 354 aaPredicted RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 PRMT8Q9NR22 394 aaPredicted RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 MED9Q9NWA0 146 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 ZNF107Q9UII5 783 aaPredicted RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 MKL2Q9ULH7 1088 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 MRPS17Q9Y2R5 130 aaKnown RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 EMC9Q9Y3B6 208 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 PCDH15Q96QU1 1955 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 IGHV1OR15-9A0A0B4J2B8 117 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 LOC107986453A0A1B0GWG9 222 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 A0A1B0GX78 115 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 A0A1W2PPC1 479 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 DCDC2BA2VCK2 349 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 DISC1C4P0D8 188 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 KRBOX1C9JBD0 128 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 H3BUI4 141 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 DUX1O43812 170 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 PNPP00491 289 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 ITGB2P05107 769 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 FCER2P06734 321 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 OR4E1P0C645 316 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 RPA2P15927 270 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 NUP62P37198 522 aaPredicted RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 UBE2MP61081 183 aaKnown RBP6.28□□□□□ -1.4
TDP1-213ENST00000555880 TDGQ13569 410 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 MELKQ14680 651 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 MEF2DQ14814 521 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 VWA2Q5GFL6 755 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 RNFT1Q5M7Z0 435 aa6.28□□□□□ -1.4
TDP1-213ENST00000555880 TMEM244Q5VVB8 128 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms