RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ZNF250P15622 560 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 PCSK6P29122 969 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 GUCA1AP43080 201 aaPredicted RBP11.71□□□□□ -0.53
SNX6-203ENST00000555416 GDI2P50395 445 aaKnown RBP11.71□□□□□ -0.53
SNX6-203ENST00000555416 RIPPLY3P57055 190 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 RPS23P62266 143 aaKnown RBP11.71□□□□□ -0.53
SNX6-203ENST00000555416 KCNMB1Q16558 191 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 CARTPTQ16568 116 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 CCDC92Q53HC0 331 aaPredicted RBP11.71□□□□□ -0.53
SNX6-203ENST00000555416 RGS7BPQ6MZT1 257 aaPredicted RBP11.71□□□□□ -0.53
SNX6-203ENST00000555416 CORO6Q6QEF8 472 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 LYPD4Q6UWN0 246 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 RASSF6Q6ZTQ3 369 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 VASH1Q7L8A9 365 aaPredicted RBP11.71□□□□□ -0.53
SNX6-203ENST00000555416 SYT9Q86SS6 491 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 JAZF1Q86VZ6 243 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 SPATA24Q86W54 205 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 OR10G2Q8NGC3 310 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 OR1J2Q8NGS2 313 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 OR1J1Q8NGS3 322 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 DGCR6LQ9BY27 220 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 POFUT1Q9H488 388 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 ARMC1Q9NVT9 282 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 ASH2LQ9UBL3 628 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 LHFPL6Q9Y693 200 aa11.71□□□□□ -0.53
SNX6-203ENST00000555416 NAV3Q8IVL0 2385 aa11.71□□□□□ -0.54
SNX6-203ENST00000555416 YLPM1P49750 1951 aaKnown RBP11.7□□□□□ -0.54
SNX6-203ENST00000555416 SONP18583 2426 aaKnown RBP11.7□□□□□ -0.54
SNX6-203ENST00000555416 RER1O15258 196 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 SGCEO43556 437 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 IDH3BO43837 385 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 NCR1O76036 304 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 HPXP02790 462 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 PSKH1P11801 424 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 NOS3P29474 1203 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 PYCR1P32322 319 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 CENPAP49450 140 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 DSCR9P59020 149 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 PCBD1P61457 104 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 LSM6P62312 80 aaKnown RBP11.7□□□□□ -0.54
SNX6-203ENST00000555416 GLO1Q04760 184 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.7□□□□□ -0.54
SNX6-203ENST00000555416 ZBTB46Q86UZ6 589 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 SLC26A10Q8NG04 563 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 SYNPRQ8TBG9 265 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 SLC25A40Q8TBP6 338 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 MARS2Q96GW9 593 aaKnown RBP11.7□□□□□ -0.54
SNX6-203ENST00000555416 POM121Q96HA1 1249 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 SNX18Q96RF0 628 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 FEVQ99581 238 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 TSSK6Q9BXA6 273 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 RAB1BQ9H0U4 201 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 LRMDAQ9H2I8 198 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 TAAR3PQ9P1P4 343 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 FKBP7Q9Y680 259 aa11.7□□□□□ -0.54
SNX6-203ENST00000555416 A0A1W2PPW3 197 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 OR6C6A6NF89 314 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 DOK2O60496 412 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 FKBP6O75344 327 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 STAMBPO95630 424 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 RENP00797 406 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 DBHP09172 617 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 DAOP14920 347 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 PRKACGP22612 351 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 CRABP1P29762 137 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 RAD52P43351 418 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 MAGEB1P43366 347 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 HTR5AP47898 357 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 PDLIM4P50479 330 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 KLF3P57682 345 aaPredicted RBP11.69□□□□□ -0.54
SNX6-203ENST00000555416 PPP1CBP62140 327 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 HIST1H3AP68431 136 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 AQP6Q13520 282 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 RSPO1Q2MKA7 263 aaPredicted RBP11.69□□□□□ -0.54
SNX6-203ENST00000555416 ELFN2Q5R3F8 820 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 HIST2H3PS2Q5TEC6 136 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 HIST2H3AQ71DI3 136 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 LINC00346Q8IVM7 164 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 ALDH16A1Q8IZ83 802 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 LNX2Q8N448 690 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 LINC00471Q8N535 108 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 IQCF1Q8N6M8 205 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 PAPD5Q8NDF8 572 aaKnown RBP11.69□□□□□ -0.54
SNX6-203ENST00000555416 OR52L1Q8NGH7 329 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 OR9Q1Q8NGQ5 310 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 ABHD4Q8TB40 342 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 GIPC3Q8TF64 312 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 IPCEF1Q8WWN9 437 aaPredicted RBP11.69□□□□□ -0.54
SNX6-203ENST00000555416 NEU4Q8WWR8 484 aaPredicted RBP11.69□□□□□ -0.54
SNX6-203ENST00000555416 C4orf45Q96LM5 186 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 BCL2L14Q9BZR8 327 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 OR2J1Q9GZK6 312 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 RACGAP1Q9H0H5 632 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 NTN4Q9HB63 628 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 TBC1D23Q9NUY8 699 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 MRPL22Q9NWU5 206 aaKnown RBP11.69□□□□□ -0.54
SNX6-203ENST00000555416 PLEK2Q9NYT0 353 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 HIVEP2P31629 2446 aa11.69□□□□□ -0.54
SNX6-203ENST00000555416 IGHV4-61A0A0C4DH41 118 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 INAFM1C9JVW0 142 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms