RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 ALG12Q9BV10 488 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 PLEKHF2Q9H8W4 249 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 RNF121Q9H920 327 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 DEPPQ9NTK1 212 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 MYOTQ9UBF9 498 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 GRHPRQ9UBQ7 328 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 GNG8Q9UK08 70 aa9.9□□□□□ -0.82
SHMT2-216ENST00000554975 KLF13Q9Y2Y9 288 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-216ENST00000554975 DOCK7Q96N67 2140 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 DSCAMO60469 2012 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 A0A0G2JMM0 328 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 TRBV2A0A0J9YWF9 115 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 TEX13CA0A0J9YWL9 993 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 FAM240BA0A1B0GVZ2 78 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 A0A1W2PPB8 328 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 A0A1W2PPR1 153 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 A0A1W2PRS3 328 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 ZC3H12DA2A288 527 aaKnown RBP9.89□□□□□ -0.83
SHMT2-216ENST00000554975 MEIOCA2RUB1 952 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 FAM166BA8MTA8 275 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 KIR3DP1A8MWS1 328 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 KLRC4-KLRK1H3BQV0 150 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 H7C1Q1 480 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 GNB5O14775 395 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 HCRTR2O43614 444 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 OR2T1O43869 369 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 ATP6V1G1O75348 118 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 SLC43A1O75387 559 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 UBL3O95164 117 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 HLA-DMAP28067 261 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 NAA10P41227 235 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-216ENST00000554975 RFX2P48378 723 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 PITPNBP48739 271 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 P2RX1P51575 399 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 MAP2K6P52564 334 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 OR12D2P58182 307 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 CTXN1P60606 82 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 NKX6-1P78426 367 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-216ENST00000554975 EGR3Q06889 387 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 SELENBP1Q13228 472 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 NDUFAF6Q330K2 333 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 ZFP69Q49AA0 526 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 TP53I3Q53FA7 332 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 FAM69AQ5T7M9 428 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 DNM1P34Q6PK57 102 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 FAM122BQ7Z309 247 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 GRINAQ7Z429 371 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 CXorf67Q86X51 503 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-216ENST00000554975 ARMC10Q8N2F6 343 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 SAMD12Q8N8I0 201 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 LRRC75AQ8NAA5 344 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 GATSQ8NAP1 163 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 DUSP18Q8NEJ0 188 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 OR5J2Q8NH18 312 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 OR8K3Q8NH51 312 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 NUBPLQ8TB37 319 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 ASB17Q8WXJ9 295 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 ST8SIA1Q92185 356 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 GHSRQ92847 366 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 ITFG2Q969R8 447 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 CREB3L1Q96BA8 519 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 OMA1Q96E52 524 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 PELI1Q96FA3 418 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 NMNAT3Q96T66 252 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 KCNJ15Q99712 375 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 TIMP4Q99727 224 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 TRAF4Q9BUZ4 470 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-216ENST00000554975 ADAM19Q9H013 955 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 COMMD4Q9H0A8 199 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 C11orf54Q9H0W9 315 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-216ENST00000554975 ZNF281Q9Y2X9 895 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 ADAM18Q9Y3Q7 739 aa9.89□□□□□ -0.83
SHMT2-216ENST00000554975 A0A1W2PRG6 482 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 NPIPB13A6NJU9 1138 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 CENPBD1B2RD01 187 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 NPIPB4C9JG80 1138 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 LRRN3E7EW58 273 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 G3V3Y1 287 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 SMAD7O15105 426 aaKnown RBP9.88□□□□□ -0.83
SHMT2-216ENST00000554975 ARHGEF9O43307 516 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 NUDT14O95848 222 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 IGHMP01871 453 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 GYPBP06028 91 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 CLUP10909 449 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 NAGAP17050 411 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 SHC1P29353 583 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 TACR3P29371 465 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 CLDN20P56880 219 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 BTG1P62324 171 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 ERVK-25P63136 954 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 PLGLB1Q02325 96 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 ZNF117Q03924 483 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 RPL18Q07020 188 aaKnown RBP9.88□□□□□ -0.83
SHMT2-216ENST00000554975 RASGEF1BQ0VAM2 473 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 SLC25A35Q3KQZ1 300 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 UBE2NLQ5JXB2 153 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 ZNF57Q68EA5 555 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-216ENST00000554975 TIGD3Q6B0B8 471 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 OPN5Q6U736 354 aa9.88□□□□□ -0.83
SHMT2-216ENST00000554975 C9orf40Q8IXQ3 194 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms