RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 TIMM23BQ5SRD1 257 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 SLC35F1Q5T1Q4 408 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 NCMAPQ5T1S8 102 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 OR2G6Q5TZ20 316 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 C1orf140Q5VVS0 124 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 LRRC75A-AS1Q8N1F1 130 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 ACBD7Q8N6N7 88 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 TMEM99Q8N816 258 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 AKAP1Q92667 903 aaKnown RBP eCLIP10.91□□□□□ -0.66
SHMT2-214ENST00000554604 UFD1Q92890 307 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 PTP4A1Q93096 173 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 TMEM204Q9BSN7 226 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 MALT1Q9UDY8 824 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 SSR3Q9UNL2 185 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 CAB39Q9Y376 341 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-214ENST00000554604 SF3B6Q9Y3B4 125 aaKnown RBP10.91□□□□□ -0.66
SHMT2-214ENST00000554604 NF1P21359 2839 aa10.91□□□□□ -0.66
SHMT2-214ENST00000554604 OR5H1A6NKK0 313 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 AQP7P3A6NL99 342 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 ZNF670-ZNF695F2Z2N8 137 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 IMPA2O14732 288 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 AKAP8O43823 692 aaKnown RBP10.9□□□□□ -0.66
SHMT2-214ENST00000554604 APOL3O95236 402 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 GAAP10253 952 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 APEHP13798 732 aaKnown RBP10.9□□□□□ -0.66
SHMT2-214ENST00000554604 FOSL1P15407 271 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 GTF2E2P29084 291 aaKnown RBP10.9□□□□□ -0.66
SHMT2-214ENST00000554604 NOS3P29474 1203 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 NTF4P34130 210 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 SOX6P35712 828 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 ATP6V1E1P36543 226 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 CAPZA2P47755 286 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 TGFBR3Q03167 851 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 POU4F2Q12837 409 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 CRMP1Q14194 572 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 ZNF74Q16587 644 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 LIPKQ5VXJ0 399 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 OR7E24Q6IFN5 339 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 TMPRSS11AQ6ZMR5 421 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 SHFQ7M4L6 423 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 ZBTB46Q86UZ6 589 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 MFSD4AQ8N468 514 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 ZNF611Q8N823 705 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 OR9K2Q8NGE7 335 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 OR51G2Q8NGK0 314 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 STK35Q8TDR2 534 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 FBXW5Q969U6 566 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 SLC25A36Q96CQ1 311 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 ERMAPQ96PL5 475 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-214ENST00000554604 TEAD3Q99594 435 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 SF3B5Q9BWJ5 86 aaKnown RBP10.9□□□□□ -0.66
SHMT2-214ENST00000554604 CDADC1Q9BWV3 514 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 ASPNQ9BXN1 380 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 NDEL1Q9GZM8 345 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 OCEL1Q9H607 264 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 RNF167Q9H6Y7 350 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 MED20Q9H944 212 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 HIF3AQ9Y2N7 669 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 CORINQ9Y5Q5 1042 aa10.9□□□□□ -0.66
SHMT2-214ENST00000554604 CSPG4Q6UVK1 2322 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 A0A075B6Q4 140 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 A0A1B0GVG6 124 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 MCIDASD6RGH6 385 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 KRT33AO76009 404 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 VAMP5O95183 116 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 BMP4P12644 408 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 ZNF12P17014 697 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 GABRA5P31644 462 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 RPS5P46782 204 aaKnown RBP10.89□□□□□ -0.67
SHMT2-214ENST00000554604 ACTC1P68032 377 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 ACTA1P68133 377 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 GPR50Q13585 617 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 LCN1P1Q5VSP4 162 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 C9orf135Q5VTT2 229 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 ADAM5Q6NVV9 412 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 C16orf87Q6PH81 154 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 CD200R1LQ6Q8B3 271 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 ZNF322Q6U7Q0 402 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-214ENST00000554604 AAED1Q7RTV5 226 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 LHFPL3Q86UP9 236 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 IGFN1Q86VF2 1251 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 LRRC17Q8N6Y2 441 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 LRRC75AQ8NAA5 344 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 POMGNT2Q8NAT1 580 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 OR52N5Q8NH56 324 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 FNDC8Q8TC99 324 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 GATAD2BQ8WXI9 593 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 OTULINQ96BN8 352 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 COQ7Q99807 217 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 HCAR1Q9BXC0 346 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 EXOSC4Q9NPD3 245 aaKnown RBP10.89□□□□□ -0.67
SHMT2-214ENST00000554604 NRIP3Q9NQ35 241 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 SLC7A10Q9NS82 523 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 LAMP3Q9UQV4 416 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 PEX16Q9Y5Y5 336 aa10.89□□□□□ -0.67
SHMT2-214ENST00000554604 ZANQ9Y493 2812 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 TRDV1A0A1B0GX56 115 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 DPRXA6NFQ7 191 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 C12orf71A8MTZ7 269 aa10.88□□□□□ -0.67
SHMT2-214ENST00000554604 J3QRK9 145 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms