RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 TMEM267Q0VDI3 215 aaPredicted RBP3.03□□□□□ -1.92
SYNE2-212ENST00000554584 NUDT10Q8NFP7 164 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 NUDT11Q96G61 164 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 CNN2Q99439 309 aaKnown RBP3.03□□□□□ -1.92
SYNE2-212ENST00000554584 RNF2Q99496 336 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 LOXL2Q9Y4K0 774 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 LRP5LA4QPB2 252 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 CCR9P51686 369 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 AIF1P55008 147 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 ETFDHQ16134 617 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 TMEM205Q6UW68 189 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 HIST2H3AQ71DI3 136 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 SPRED1Q7Z699 444 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 NEIL3Q8TAT5 605 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 ARL11Q969Q4 196 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 LMF2Q9BU23 707 aaKnown RBP3.03□□□□□ -1.92
SYNE2-212ENST00000554584 PCBD2Q9H0N5 130 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 FAM124BQ9H5Z6 455 aaPredicted RBP3.03□□□□□ -1.92
SYNE2-212ENST00000554584 CSNK1G3Q9Y6M4 447 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 H0YGG7 62 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 MT-CO2P00403 227 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 TBPP20226 339 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 TMBIM6P55061 237 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 IL10RBQ08334 325 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 SNAI3Q3KNW1 292 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 ZMAT1Q5H9K5 638 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 NSUN5P2Q63ZY6 315 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 ANKRD54Q6NXT1 300 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 RBPMS2Q6ZRY4 209 aaKnown RBP3.03□□□□□ -1.92
SYNE2-212ENST00000554584 OR8G5Q8NG78 346 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 DAZLQ92904 295 aaKnown RBP3.03□□□□□ -1.92
SYNE2-212ENST00000554584 TMIGD2Q96BF3 282 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 MKRN2OSH3BPM6 223 aa3.03□□□□□ -1.93
SYNE2-212ENST00000554584 CSN1S1P47710 185 aa3.03□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF573Q86YE8 665 aa3.03□□□□□ -1.93
SYNE2-212ENST00000554584 DTWD2Q8NBA8 298 aa3.03□□□□□ -1.93
SYNE2-212ENST00000554584 OR6F1Q8NGZ6 308 aa3.03□□□□□ -1.93
SYNE2-212ENST00000554584 CMSS1Q9BQ75 279 aaKnown RBP3.03□□□□□ -1.93
SYNE2-212ENST00000554584 MROQ9BYG7 248 aa3.03□□□□□ -1.93
SYNE2-212ENST00000554584 ZMIZ1Q9ULJ6 1067 aa3.03□□□□□ -1.93
SYNE2-212ENST00000554584 H3BP45 60 aa3.03□□□□□ -1.93
SYNE2-212ENST00000554584 CD38P28907 300 aa3.03□□□□□ -1.93
SYNE2-212ENST00000554584 REG1BP48304 166 aa3.03□□□□□ -1.93
SYNE2-212ENST00000554584 MEP1BQ16820 701 aa3.03□□□□□ -1.93
SYNE2-212ENST00000554584 OR1P1Q8NH06 330 aa3.03□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF502Q8TBZ5 544 aa3.03□□□□□ -1.93
SYNE2-212ENST00000554584 ASB7Q9H672 318 aa3.03□□□□□ -1.93
SYNE2-212ENST00000554584 GLRX2Q9NS18 164 aa3.03□□□□□ -1.93
SYNE2-212ENST00000554584 RFPL3O75679 317 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 OPRM1P35372 400 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 AHRP35869 848 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 NUDT1P36639 197 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 ACAA2P42765 397 aaKnown RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TLDC1Q6P9B6 456 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 LCTLQ6UWM7 567 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 FBXL14Q8N1E6 418 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 DNAJC19Q96DA6 116 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 BOD1Q96IK1 185 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 UQCC2Q9BRT2 126 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 ALG12Q9BV10 488 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 PLXND1Q9Y4D7 1925 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TMED7-TICAM2A0A0A6YYA0 188 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 A0A1W2PQL4 384 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 J3KTA2 159 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 KLRC4O43908 158 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 NSA2O95478 260 aaKnown RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 SLC6A8P48029 635 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF137PP52743 207 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 RAB35Q15286 201 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 SYPL1Q16563 259 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 LGALSLQ3ZCW2 172 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 EPGNQ6UW88 154 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 GPR78Q96P69 363 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TMED7Q9Y3B3 224 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 IFT172Q9UG01 1749 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TSPAN11A1L157 253 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CACNG3O60359 315 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 PRF1P14222 555 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 FADDQ13158 208 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 KCNJ11Q14654 390 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 SIAEQ9HAT2 523 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 KMT2EQ8IZD2 1858 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TMEM235A6NFC5 223 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF701M0R085 212 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 IRAK2O43187 625 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 VSIG10L2P0DP72 767 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 HOXD3P31249 432 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CAMK2BQ13554 666 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 SRSF7Q16629 238 aaKnown RBP eCLIP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TFAP2EQ6VUC0 442 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 NOXA1Q86UR1 476 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 ST6GALNAC3Q8NDV1 305 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 OR9Q2Q8NGE9 314 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF641Q96N77 438 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 KLK15Q9H2R5 256 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 MBNL1Q9NR56 388 aaKnown RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TAAR2Q9P1P5 351 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 ZCWPW2A0A1B0GU75 182 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 SSSCA1O60232 199 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 IL3RAP26951 378 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms