RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 EFNA1P20827 205 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 DRD1P21728 446 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 KDELR1P24390 212 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 IVDP26440 423 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 CCKARP32238 428 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 POLR2IP36954 125 aaKnown RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 CEACAM3P40198 252 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 CXCL12P48061 93 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 STK19P49842 368 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 VAMP7P51809 220 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 CDKN2DP55273 166 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 SUMO3P55854 103 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 TAS2R38P59533 333 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 RPL23AP62750 156 aaKnown RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 RAB1AP62820 205 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 HERV-K104P63124 156 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 PMPCAQ10713 525 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 OLIG2Q13516 323 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 RUNX2Q13950 521 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 PTGES3Q15185 160 aaKnown RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 LGALSLQ3ZCW2 172 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 PDLIM3Q53GG5 364 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 AGKQ53H12 422 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 MESTQ5EB52 335 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 RNASE12Q5GAN4 147 aaKnown RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 OR2G6Q5TZ20 316 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 TANGO2Q6ICL3 276 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 FAM71E1Q6IPT2 247 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 DNM1P34Q6PK57 102 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 UNQ9370/PRO34162Q6UXP9 181 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 SERPINA13PQ6UXR4 307 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 ZNF562Q6V9R5 426 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 KCTD9Q7L273 389 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 FCRLAQ7L513 359 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 SSX6Q7RTT6 188 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 ZDHHC21Q8IVQ6 265 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 DEFB107AQ8IZN7 70 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 ZBTB2Q8N680 514 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 OR11H1Q8NG94 326 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 OR9K2Q8NGE7 335 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 OR51L1Q8NGJ5 315 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 OR10R2Q8NGX6 335 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 OR11H2Q8NH07 326 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 OR10A6Q8NH74 314 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 LMO3Q8TAP4 145 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 GPR151Q8TDV0 419 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 ASB17Q8WXJ9 295 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 ASB13Q8WXK3 278 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 SMPDL3BQ92485 455 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 MRPS31Q92665 395 aaKnown RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 RORBQ92753 470 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 SEMA4DQ92854 862 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 COQ8BQ96D53 544 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 LGALS12Q96DT0 336 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 CCDC126Q96EE4 140 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 P2RY11Q96G91 374 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 APIPQ96GX9 242 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 SFRP2Q96HF1 295 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 CELF6Q96J87 481 aaKnown RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 POM121L2Q96KW2 1035 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 FCRL1Q96LA6 429 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 GFM1Q96RP9 751 aaKnown RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 FIZ1Q96SL8 496 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 EPYCQ99645 322 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 KXD1Q9BQD3 176 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 WRAP53Q9BUR4 548 aaKnown RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 FGFBP2Q9BYJ0 223 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 OR2AG1Q9H205 316 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 CDC42EP4Q9H3Q1 356 aaKnown RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 DHX35Q9H5Z1 703 aaKnown RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 ZNF385DQ9H6B1 395 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 GEMIN7Q9H840 131 aaKnown RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 HRASLSQ9HDD0 168 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 OBP2BQ9NPH6 170 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 MBNL1Q9NR56 388 aaKnown RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 HEBP1Q9NRV9 189 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 ARMCX1Q9P291 453 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 HSPB7Q9UBY9 170 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 FBXL4Q9UKA2 621 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 ZNF490Q9ULM2 529 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 RBM7Q9Y580 266 aaKnown RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 PCYT1BQ9Y5K3 369 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-227ENST00000554491 PTGDR2Q9Y5Y4 395 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 URGCP-MRPS24S4R325 110 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 PI4KAP42356 2102 aa3.95□□□□□ -1.78
ATXN3-227ENST00000554491 THADAQ6YHU6 1953 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 MYO16Q9Y6X6 1858 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 TDRD15B5MCY1 1934 aaKnown RBP3.94□□□□□ -1.78
ATXN3-227ENST00000554491 ADAMTS9Q9P2N4 1935 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 IGKV2D-30A0A075B6S6 120 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 NPIPA5A0A0B4J1W7 369 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 LY6G6EA0A0G2JKS1 128 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 NPIPA5E9PKD4 350 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 F6UZH7 168 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 NPIPA3F8WFD2 350 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 RPL36A-HNRNPH2H7BZ11 118 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 SGK494L7N484 410 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 DVL1O14640 695 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 HS3ST1O14792 307 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 PLRG1O43660 514 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms