RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 SFRP5Q5T4F7 317 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 DCAF12Q5T6F0 453 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 METAP1DQ6UB28 335 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-212ENST00000554467 SLC16A9Q7RTY1 509 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 CLRN3Q8NCR9 226 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 TRMT10AQ8TBZ6 339 aaKnown RBP10.47□□□□□ -0.73
SHMT2-212ENST00000554467 YIPF5Q969M3 257 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 RNF166Q96A37 237 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-212ENST00000554467 WDR89Q96FK6 387 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-212ENST00000554467 LRFN5Q96NI6 719 aa10.47□□□□□ -0.73
SHMT2-212ENST00000554467 CHCHD2Q9Y6H1 151 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-212ENST00000554467 NSG1A0A0A6YYJ2 146 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 IGKV1D-43A0A0B4J1Z2 117 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 A0A1W2PNU3 283 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-212ENST00000554467 M0R233 179 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 GMDSO60547 372 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 WDPCPO95876 746 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 IGF2P01344 180 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 APEHP13798 732 aaKnown RBP10.46□□□□□ -0.73
SHMT2-212ENST00000554467 CXCL2P19875 107 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 HOXA1P49639 335 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-212ENST00000554467 TAS2R43P59537 309 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 MYBPHQ13203 477 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 PLPPR5Q32ZL2 321 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 EEF1A1P5Q5VTE0 462 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 PRSS45Q7RTY3 260 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 MISPQ8IVT2 679 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 PIAS4Q8N2W9 510 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-212ENST00000554467 OR4K17Q8NGC6 315 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 OR10AC1Q8NH08 325 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 RGP1Q92546 391 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-212ENST00000554467 RFT1Q96AA3 541 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 IMMP1LQ96LU5 166 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 SFXN2Q96NB2 322 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 OR5B2Q96R09 309 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 NKX3-1Q99801 234 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-212ENST00000554467 B9D1Q9UPM9 204 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 ZNF292O60281 2723 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 F8W036 122 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 ZNF593O00488 134 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-212ENST00000554467 CDX4O14627 284 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-212ENST00000554467 RAMP1O60894 148 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 FGF2P09038 288 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 SULT1A3P0DMM9 295 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 SULT1A4P0DMN0 295 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 NTRK2Q16620 822 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 FTMTQ8N4E7 242 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 ZNF519Q8TB69 540 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 ST8SIA1Q92185 356 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 NSMAFQ92636 917 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 INTS14Q96SY0 518 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 SLC6A15Q9H2J7 730 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 TXNIPQ9H3M7 391 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 NOX4Q9NPH5 578 aa10.46□□□□□ -0.73
SHMT2-212ENST00000554467 NXT1Q9UKK6 140 aaKnown RBP10.46□□□□□ -0.73
SHMT2-212ENST00000554467 COA3Q9Y2R0 106 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-212ENST00000554467 ZNF814B7Z6K7 855 aa10.46□□□□□ -0.74
SHMT2-212ENST00000554467 OGG1O15527 345 aa10.46□□□□□ -0.74
SHMT2-212ENST00000554467 HPXP02790 462 aa10.46□□□□□ -0.74
SHMT2-212ENST00000554467 JMJD7P0C870 316 aa10.46□□□□□ -0.74
SHMT2-212ENST00000554467 AKR1D1P51857 326 aa10.46□□□□□ -0.74
SHMT2-212ENST00000554467 SLC36A2Q495M3 483 aa10.46□□□□□ -0.74
SHMT2-212ENST00000554467 SFXN4Q6P4A7 337 aa10.46□□□□□ -0.74
SHMT2-212ENST00000554467 SEZ6L2Q6UXD5 910 aa10.46□□□□□ -0.74
SHMT2-212ENST00000554467 NLRC3Q7RTR2 1065 aa10.46□□□□□ -0.74
SHMT2-212ENST00000554467 CDC20BQ86Y33 519 aa10.46□□□□□ -0.74
SHMT2-212ENST00000554467 LINC00346Q8IVM7 164 aa10.46□□□□□ -0.74
SHMT2-212ENST00000554467 SERPINA12Q8IW75 414 aa10.46□□□□□ -0.74
SHMT2-212ENST00000554467 SYS1Q8N2H4 156 aa10.46□□□□□ -0.74
SHMT2-212ENST00000554467 TMEM156Q8N614 296 aa10.46□□□□□ -0.74
SHMT2-212ENST00000554467 OR51A4Q8NGJ6 313 aa10.46□□□□□ -0.74
SHMT2-212ENST00000554467 MRPL22Q9NWU5 206 aaKnown RBP10.46□□□□□ -0.74
SHMT2-212ENST00000554467 GPR160Q9UJ42 338 aa10.46□□□□□ -0.74
SHMT2-212ENST00000554467 DOCK10Q96BY6 2186 aa10.46□□□□□ -0.74
SHMT2-212ENST00000554467 PRSS44E7EML9 344 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 ABCD4O14678 606 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 GLAP06280 429 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 CD59P13987 128 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 MTNR1BP49286 362 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 CCR6P51684 374 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 IL10RAQ13651 578 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 GSG1Q2KHT4 349 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 CARD17Q5XLA6 110 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 RPL22L1Q6P5R6 122 aaKnown RBP10.45□□□□□ -0.74
SHMT2-212ENST00000554467 DHRS13Q6UX07 377 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 OR2M3Q8NG83 312 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 STK35Q8TDR2 534 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 FOXJ2Q9P0K8 574 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 PADI1Q9ULC6 663 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 LOC102723996A0A087X1L8 192 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 A0A0G2JK05 382 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 KRBOX1C9JBD0 128 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 NPIPA5E9PKD4 350 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 FLRT2O43155 660 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 OR2T1O43869 369 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 SC5DO75845 299 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 APOBEC1P41238 236 aaKnown RBP10.45□□□□□ -0.74
SHMT2-212ENST00000554467 ARHGDIBP52566 201 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 CLDN12P56749 244 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 ADAM8P78325 824 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms