RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ATP1B2P14415 290 aaPredicted RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 STOMP27105 288 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 HTR2CP28335 458 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 TIMP3P35625 211 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 TSFMP43897 325 aaKnown RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 NPBWR1P48145 328 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 GLRBP48167 497 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 RRADP55042 308 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 CLDN12P56749 244 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ERVK11-1P61568 191 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF91Q05481 1191 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 CDK5R2Q13319 367 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 FOXE3Q13461 319 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 NFATC2Q13469 925 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF235Q14590 738 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 PTGR1Q14914 329 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 DEFB109BQ30KR1 87 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 BSXQ3C1V8 233 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 PIGGQ5H8A4 983 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SPIN3Q5JUX0 258 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 C6orf52Q5T4I8 152 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SAMD5Q5TGI4 173 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SLX4IPQ5VYV7 408 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 DNAJC24Q6P3W2 148 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 FAM199XQ6PEV8 388 aaPredicted RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 TRMT10BQ6PF06 316 aaKnown RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 C16orf89Q6UX73 402 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 DPY19L2P2Q6ZN68 376 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 C20orf204Q6ZNR8 217 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 Q6ZS92 163 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SLC16A14Q7RTX9 510 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SFTPA2Q8IWL1 248 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 OR6V1Q8N148 313 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 HSD17B11Q8NBQ5 300 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 NECAP1Q8NC96 275 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 NUP43Q8NFH3 380 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 OR10Q1Q8NGQ4 319 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 OR14L1PQ8NHC6 308 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 GLYATL1Q969I3 302 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 PTH2Q96A98 100 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 OTULINQ96BN8 352 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ZG16BQ96DA0 208 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 CCDC126Q96EE4 140 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 COQ2Q96H96 371 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 CXorf58Q96LI9 332 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ALKBH3Q96Q83 286 aaPredicted RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 HBEGFQ99075 208 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SNRNP25Q9BV90 132 aaKnown RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 MND1Q9BWT6 205 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 OR10A5Q9H207 317 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 RHOJQ9H4E5 214 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 MANSC1Q9H8J5 431 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SYNPO2LQ9H987 977 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 WDR41Q9HAD4 459 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 IL1RL2Q9HB29 575 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 GCM1Q9NP62 436 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 B3GAT2Q9NPZ5 323 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 TRIM36Q9NQ86 728 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 STOX2Q9P2F5 926 aaPredicted RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 PSORS1C1Q9UIG5 152 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ZDHHC2Q9UIJ5 367 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 PRPF19Q9UMS4 504 aaKnown RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 A4GNTQ9UNA3 340 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 USP22Q9UPT9 525 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SLC7A11Q9UPY5 501 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SF3B6Q9Y3B4 125 aaKnown RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 FLNBO75369 2602 aaKnown RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 A0A1B0GVI7 797 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 TLCD2A6NGC4 264 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 NPIPB5A8MRT5 1133 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 TRIM49D1C9J1S8 452 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 C9J4A7 227 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 PRSS46E5RG02 174 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 K7EM74 188 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 LDB2O43679 373 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ITM2AO43736 263 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 EDF1O60869 148 aaKnown RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 FCN3O75636 299 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 EML2O95834 649 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 FADS2O95864 444 aaKnown RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 IGF2P01344 180 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 GNLYP22749 145 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 CXCR1P25024 350 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 MPZP25189 248 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 IVDP26440 423 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 AK4P27144 223 aaPredicted RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 HTR2AP28223 471 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 DDOSTP39656 456 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 VHLP40337 213 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ELK3P41970 407 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 AKR1C3P42330 323 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 MAGEA3P43357 314 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 GPR1P46091 355 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SERPINB10P48595 397 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 PRKXP51817 358 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 WNT3AP56704 352 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SSBP2P81877 361 aaPredicted RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 MYBPC1Q00872 1141 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms