RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 BHLHE40O14503 412 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 KDELR3O43731 214 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 AMY2AP04746 511 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 CLTBP09497 229 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 ZNF286BP0CG31 522 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 PGA3P0DJD8 388 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 ACTC1P68032 377 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 ACTA1P68133 377 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 SIRPAP78324 504 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 PAX5Q02548 391 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 SLC35D2Q76EJ3 337 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 HMGN2P46Q86SG4 172 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 C17orf64Q86WR6 236 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 SYS1Q8N2H4 156 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 ZNF321PQ8N8H1 164 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 ASB11Q8WXH4 323 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 SNX22Q96L94 193 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 PHB2Q99623 299 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 GPR62Q9BZJ7 368 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 OR8D2Q9GZM6 311 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 NELFAQ9H3P2 528 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 CAPN10Q9HC96 672 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 KCNJ16Q9NPI9 418 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 SERINC1Q9NRX5 453 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 LRFN1Q9P244 771 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 USP36Q9P275 1121 aaKnown RBP8.63□□□□□ -1.03
SIX4-202ENST00000554079 ZFP30Q9Y2G7 519 aa8.63□□□□□ -1.03
SIX4-202ENST00000554079 PRG3Q9Y2Y8 225 aaPredicted RBP8.63□□□□□ -1.03
SIX4-202ENST00000554079 PCYT1BQ9Y5K3 369 aaPredicted RBP8.63□□□□□ -1.03
SIX4-202ENST00000554079 PUS1Q9Y606 427 aaKnown RBP eCLIP8.63□□□□□ -1.03
SIX4-202ENST00000554079 UNC119BA6NIH7 251 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 DHRS7CA6NNS2 312 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 RAB27BO00194 218 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 GEMIN2O14893 280 aaKnown RBP8.62□□□□□ -1.03
SIX4-202ENST00000554079 GPRIN2O60269 458 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 ZNF354AO60765 605 aaPredicted RBP8.62□□□□□ -1.03
SIX4-202ENST00000554079 SLC16A8O95907 504 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 CSTBP04080 98 aaKnown RBP8.62□□□□□ -1.03
SIX4-202ENST00000554079 PGA4P0DJD7 388 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 PGA5P0DJD9 388 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 OR13C7P0DN81 318 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 FOSL2P15408 326 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 PRSS3P35030 304 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 RPL29P47914 159 aaKnown RBP8.62□□□□□ -1.03
SIX4-202ENST00000554079 CX3CR1P49238 355 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 IDH3GP51553 393 aaPredicted RBP8.62□□□□□ -1.03
SIX4-202ENST00000554079 EFNB2P52799 333 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 PTTG1IPP53801 180 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 SCAND1P57086 179 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 TAS2R50P59544 299 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 ACTBP60709 375 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 ACTG1P63261 375 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 ENPP2Q13822 863 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 EBPQ15125 230 aaKnown RBP8.62□□□□□ -1.03
SIX4-202ENST00000554079 DECR1Q16698 335 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 AMZ1Q400G9 498 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 PRAMEF8Q5VWM4 474 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 PRAMEF7Q5VXH5 474 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 PSRC1Q6PGN9 363 aaPredicted RBP8.62□□□□□ -1.03
SIX4-202ENST00000554079 OGFOD3Q6PK18 319 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 TMEM205Q6UW68 189 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 DLK2Q6UY11 383 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 STAC2Q6ZMT1 411 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 MBOAT2Q6ZWT7 520 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 MED25Q71SY5 747 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 NUDT10Q8NFP7 164 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 OR6K2Q8NGY2 324 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 EXTL1Q92935 676 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 MRGPRFQ96AM1 343 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 RAB39BQ96DA2 213 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 SLC41A3Q96GZ6 507 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 FAM83CQ9BQN1 747 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 KATNBL1Q9H079 304 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 TCEAL2Q9H3H9 227 aaPredicted RBP8.62□□□□□ -1.03
SIX4-202ENST00000554079 SIRT3Q9NTG7 399 aaPredicted RBP8.62□□□□□ -1.03
SIX4-202ENST00000554079 P2RX2Q9UBL9 471 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 GNG8Q9UK08 70 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 TCFL5Q9UL49 500 aa8.62□□□□□ -1.03
SIX4-202ENST00000554079 POLR3KQ9Y2Y1 108 aaPredicted RBP8.62□□□□□ -1.03
SIX4-202ENST00000554079 TRAV18A0A075B6X5 111 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 C5orf51A6NDU8 294 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 ELOA3DA6NLF2 546 aaPredicted RBP8.61□□□□□ -1.03
SIX4-202ENST00000554079 CPSF4LA6NMK7 179 aaKnown RBP8.61□□□□□ -1.03
SIX4-202ENST00000554079 TAAR5O14804 337 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 SLCO2B1O94956 709 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 SNAI1O95863 264 aaPredicted RBP8.61□□□□□ -1.03
SIX4-202ENST00000554079 OR5I1Q13606 314 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 COA6Q5JTJ3 125 aaKnown RBP8.61□□□□□ -1.03
SIX4-202ENST00000554079 AADACL3Q5VUY0 350 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 TANGO2Q6ICL3 276 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 LEG1Q6P5S2 330 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 KCTD9Q7L273 389 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 SMIM15Q7Z3B0 74 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 NRMQ8IXM6 262 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 ZNF101Q8IZC7 436 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 GCNT2Q8N0V5 402 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 OR1P1Q8NH06 330 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 SLC2A12Q8TD20 617 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 HAS2Q92819 552 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 MOAP1Q96BY2 351 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms