RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 FBXL7Q9UJT9 491 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 BAIAP2Q9UQB8 552 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 TIMM10BQ9Y5J6 103 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 FKBP7Q9Y680 259 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 APCP25054 2843 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 ITPR2Q14571 2701 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 TCRBV3S1A0A5B6 114 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 TMEM82A0PJX8 343 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 FKBP6O75344 327 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 PEX14O75381 377 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 GASTP01350 101 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 HLA-DQA2P01906 255 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 OR4A8P0C604 315 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 DANCRP0C864 163 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 PATE4P0C8F1 98 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 FCGR1AP12314 374 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 ANXA8P13928 327 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 CD99P14209 185 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 ZNF14P17017 642 aaPredicted RBP7.22□□□□□ -1.25
PSEN1-209ENST00000553855 LAP3P28838 519 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 CDKN1AP38936 164 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 RAD52P43351 418 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 NUDT6P53370 316 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 GLO1Q04760 184 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 PPP1R8Q12972 351 aaKnown RBP7.22□□□□□ -1.25
PSEN1-209ENST00000553855 FHL1Q13642 323 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 MOGQ16653 247 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 PGGHGQ32M88 737 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 CLEC12AQ5QGZ9 265 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 FAM27BQ5VT28 67 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 FAM122BQ7Z309 247 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 TGIF2LYQ8IUE0 185 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 GLB1L2Q8IW92 636 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 WDFY1Q8IWB7 410 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 C1orf174Q8IYL3 243 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 CLDN22Q8N7P3 220 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 ATG16L2Q8NAA4 619 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 OR2T33Q8NG76 320 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 OR4C15Q8NGM1 316 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 OR4K13Q8NH42 304 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 SNX18Q96RF0 628 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 BDH2Q9BUT1 245 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 TSSK6Q9BXA6 273 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 CACNG6Q9BXT2 260 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 DGCR6LQ9BY27 220 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 RAB1BQ9H0U4 201 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 SYT4Q9H2B2 425 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 PLK3Q9H4B4 646 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 ZNF442Q9H7R0 627 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 NOX3Q9HBY0 568 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 POLE4Q9NR33 117 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 ZNF701Q9NV72 531 aaPredicted RBP7.22□□□□□ -1.25
PSEN1-209ENST00000553855 VSX1Q9NZR4 365 aaPredicted RBP7.22□□□□□ -1.25
PSEN1-209ENST00000553855 KLHL21Q9UJP4 597 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 NDRG4Q9ULP0 352 aaKnown RBP7.22□□□□□ -1.25
PSEN1-209ENST00000553855 FREM1Q5H8C1 2179 aa7.22□□□□□ -1.25
PSEN1-209ENST00000553855 ARRDC5A6NEK1 342 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 RIIAD1A6NNX1 92 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 TPD52L2O43399 206 aaKnown RBP7.21□□□□□ -1.26
PSEN1-209ENST00000553855 RRP9O43818 475 aaKnown RBP7.21□□□□□ -1.26
PSEN1-209ENST00000553855 MT-ND5P03915 603 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 LCKP06239 509 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 CELA3BP08861 270 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 PAX1P15863 534 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 HIST1H1CP16403 213 aaKnown RBP7.21□□□□□ -1.26
PSEN1-209ENST00000553855 ZNF823P16415 610 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 ZNF3P17036 446 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 ZNF32P17041 273 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 PAICSP22234 425 aaKnown RBP7.21□□□□□ -1.26
PSEN1-209ENST00000553855 NR4A1P22736 598 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 FASP25445 335 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 STOMP27105 288 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 POU1F1P28069 291 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 CALCRP30988 508 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 GLRXP35754 106 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 ERFP50548 548 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 DSCR9P59020 149 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.21□□□□□ -1.26
PSEN1-209ENST00000553855 PABPC1L2AQ5JQF8 200 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 RGS7BPQ6MZT1 257 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-209ENST00000553855 CLEC2AQ6UVW9 174 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 B3GLCTQ6Y288 498 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 HIPK1Q86Z02 1210 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 CLRN3Q8NCR9 226 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 ICA1LQ8NDH6 482 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 SDR9C7Q8NEX9 313 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 PROKR2Q8NFJ6 384 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 OR52E2Q8NGJ4 325 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 OR2AJ1Q8NGZ0 328 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 OR2T4Q8NH00 348 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 SNX33Q8WV41 574 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 DNAJC9Q8WXX5 260 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 C11orf40Q8WZ69 217 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 NMD3Q96D46 503 aaKnown RBP7.21□□□□□ -1.26
PSEN1-209ENST00000553855 PLEKHA8Q96JA3 519 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 RAB3IPQ96QF0 476 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-209ENST00000553855 NMNAT3Q96T66 252 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 GPA33Q99795 319 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 VRK1Q99986 396 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-209ENST00000553855 RHNO1Q9BSD3 238 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms