RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 NUP50Q9UKX7 468 aa8.39□□□□□ -1.07
ACTN1-210ENST00000553779 UGT2A1Q9Y4X1 527 aa8.39□□□□□ -1.07
ACTN1-210ENST00000553779 TRAV27A0A087WT01 109 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 DNAJC9-AS1A6NH13 148 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 NPIPB13A6NJU9 1138 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 EFCAB9A8MZ26 197 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 NPIPB4C9JG80 1138 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 H7C1C5 153 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 MRASO14807 208 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 UBOX5O94941 541 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 ATP6V1G2O95670 118 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 IGHMP01871 453 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 THRBP10828 461 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 EGR1P18146 543 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 BTG1P62324 171 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 LCN6P62502 163 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 ELF3P78545 371 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-210ENST00000553779 SCRN3Q0VDG4 424 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 ST3GAL3Q11203 375 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 LAPTM4AQ15012 233 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 MAPRE2Q15555 327 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 CYBRD1Q53TN4 286 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 RABL3Q5HYI8 236 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 ARMC4Q5T2S8 1044 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 FAM27BQ5VT28 67 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 NANOGP8Q6NSW7 305 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 BTNL3Q6UXE8 466 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 CCDC80Q76M96 950 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 PIGWQ7Z7B1 504 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 OAFQ86UD1 273 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 MUC20Q8N307 709 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-210ENST00000553779 PCYOX1LQ8NBM8 494 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 OR8J3Q8NGG0 315 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 OR51A7Q8NH64 312 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 PRRC1Q96M27 445 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 COG8Q96MW5 612 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 SEPHS2Q99611 448 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 FNDC11Q9BVV2 318 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 EMC7Q9NPA0 242 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 ESM1Q9NQ30 184 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 MAN2C1Q9NTJ4 1040 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 TMEM106BQ9NUM4 274 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 MRGBPQ9NV56 204 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 GRHPRQ9UBQ7 328 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 EGFL7Q9UHF1 273 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 PPP1R3CQ9UQK1 317 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 NOTCH1P46531 2555 aa8.38□□□□□ -1.07
ACTN1-210ENST00000553779 IGKV1D-43A0A0B4J1Z2 117 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 HTR3EA5X5Y0 456 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 BBIP1A8MTZ0 92 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 GSTA4O15217 222 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 SGCEO43556 437 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 ZNF682O95780 498 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 NGFP01138 241 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 IGF2P01344 180 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 IGHV2-70P01814 119 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 IFNW1P05000 195 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 CD55P08174 381 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 TROVE2P10155 538 aaKnown RBP eCLIP8.37□□□□□ -1.07
ACTN1-210ENST00000553779 RPS2P15880 293 aaKnown RBP8.37□□□□□ -1.07
ACTN1-210ENST00000553779 PRTN3P24158 256 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 MDH2P40926 338 aaKnown RBP8.37□□□□□ -1.07
ACTN1-210ENST00000553779 MTNR1AP48039 350 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 CENPAP49450 140 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 ZNF133P52736 654 aaPredicted RBP8.37□□□□□ -1.07
ACTN1-210ENST00000553779 SLC25A47Q6Q0C1 308 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 ZNF730Q6ZMV8 503 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 CYP4Z1Q86W10 505 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 NRMQ8IXM6 262 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 CLDN22Q8N7P3 220 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 ZDHHC22Q8N966 263 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 ATG16L2Q8NAA4 619 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 ITLN1Q8WWA0 313 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 LRRC58Q96CX6 371 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 MAGEB18Q96M61 343 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 FAM210AQ96ND0 272 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 ZNF570Q96NI8 536 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 PATZ1Q9HBE1 687 aaKnown RBP8.37□□□□□ -1.07
ACTN1-210ENST00000553779 GID8Q9NWU2 228 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 PLEK2Q9NYT0 353 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 HIF3AQ9Y2N7 669 aa8.37□□□□□ -1.07
ACTN1-210ENST00000553779 PPIAL4EA0A075B759 164 aa8.36□□□□□ -1.07
ACTN1-210ENST00000553779 IGHV3OR16-10A0A075B7F0 116 aa8.36□□□□□ -1.07
ACTN1-210ENST00000553779 PPIAL4CA0A0B4J2A2 164 aa8.36□□□□□ -1.07
ACTN1-210ENST00000553779 LRRC30A6NM36 301 aa8.36□□□□□ -1.07
ACTN1-210ENST00000553779 FAM220BPB1ANY3 271 aa8.36□□□□□ -1.07
ACTN1-210ENST00000553779 PPIAL4DF5H284 164 aa8.36□□□□□ -1.07
ACTN1-210ENST00000553779 AHCYL1O43865 530 aa8.36□□□□□ -1.07
ACTN1-210ENST00000553779 ADH4P08319 380 aa8.36□□□□□ -1.07
ACTN1-210ENST00000553779 PPIAL4FP0DN26 164 aa8.36□□□□□ -1.07
ACTN1-210ENST00000553779 HKR1P10072 659 aa8.36□□□□□ -1.07
ACTN1-210ENST00000553779 IRF2P14316 349 aa8.36□□□□□ -1.07
ACTN1-210ENST00000553779 ZFP36P26651 326 aaKnown RBP8.36□□□□□ -1.07
ACTN1-210ENST00000553779 YAP1P46937 504 aaKnown RBP8.36□□□□□ -1.07
ACTN1-210ENST00000553779 GNB2P62879 340 aa8.36□□□□□ -1.07
ACTN1-210ENST00000553779 PSG7Q13046 419 aa8.36□□□□□ -1.07
ACTN1-210ENST00000553779 ZNF154Q13106 437 aa8.36□□□□□ -1.07
ACTN1-210ENST00000553779 TRAM2Q15035 370 aa8.36□□□□□ -1.07
ACTN1-210ENST00000553779 TMEM155Q4W5P6 130 aa8.36□□□□□ -1.07
ACTN1-210ENST00000553779 NLRC3Q7RTR2 1065 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms