RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 MYL2P10916 166 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 LAMP1P11279 417 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 CD36P16671 472 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 HLA-GP17693 338 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 IDSP22304 550 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 DCKP27707 260 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 HTR2CP28335 458 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 CD1CP29017 333 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 CRABP1P29762 137 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 CALCRP30988 508 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 SLC1A1P43005 524 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 XKP51811 444 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 CCL7P80098 99 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 FLI1Q01543 452 aaPredicted RBP3.03□□□□□ -1.92
TDP1-207ENST00000553617 KCNJ11Q14654 390 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 ARL6IP1Q15041 203 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 BSXQ3C1V8 233 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 SLC36A2Q495M3 483 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 VPS26BQ4G0F5 336 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 UTF1Q5T230 341 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 IDNKQ5T6J7 187 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 OR2G6Q5TZ20 316 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 HACD4Q5VWC8 232 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 LRRC31Q6UY01 552 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 SLC16A14Q7RTX9 510 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 TIPARPQ7Z3E1 657 aaKnown RBP3.03□□□□□ -1.92
TDP1-207ENST00000553617 HDDC2Q7Z4H3 204 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 NT5DC3Q86UY8 548 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 MYPOPQ86VE0 399 aaPredicted RBP3.03□□□□□ -1.92
TDP1-207ENST00000553617 PLA2G4DQ86XP0 818 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 MARCH9Q86YJ5 346 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 ERI1Q8IV48 349 aaKnown RBP3.03□□□□□ -1.92
TDP1-207ENST00000553617 C9orf40Q8IXQ3 194 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 FAM71AQ8IYT1 594 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 PGAM4Q8N0Y7 254 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 STK40Q8N2I9 435 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 OR2L13Q8N349 312 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 C12orf29Q8N999 325 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 CDRT4Q8N9R6 151 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 OR2L2Q8NH16 312 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 OR2V1Q8NHB1 315 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 DYNC2LI1Q8TCX1 351 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 BLOC1S5Q8TDH9 187 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 CXorf40AQ8TE69 158 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 SETD7Q8WTS6 366 aaKnown RBP3.03□□□□□ -1.92
TDP1-207ENST00000553617 TRUB1Q8WWH5 349 aaKnown RBP3.03□□□□□ -1.92
TDP1-207ENST00000553617 FRAT1Q92837 279 aaPredicted RBP3.03□□□□□ -1.92
TDP1-207ENST00000553617 CDS1Q92903 461 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 ANKRD36BP1Q96IX9 119 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 JSRP1Q96MG2 331 aaPredicted RBP3.03□□□□□ -1.92
TDP1-207ENST00000553617 PRAP1Q96NZ9 151 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 FMO2Q99518 471 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 BEX2Q9BXY8 128 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 PORCNQ9H237 461 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 CAB39LQ9H9S4 337 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 VCX3AQ9NNX9 186 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 TIGARQ9NQ88 270 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 PRSS16Q9NQE7 514 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 NANSQ9NR45 359 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 INPP5EQ9NRR6 644 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 BABAM2Q9NXR7 383 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 B3GNT2Q9NY97 397 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 CCDC59Q9P031 241 aaKnown RBP3.03□□□□□ -1.92
TDP1-207ENST00000553617 SLC2A6Q9UGQ3 507 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 RIMS3Q9UJD0 308 aa3.03□□□□□ -1.92
TDP1-207ENST00000553617 RAB3GAP2Q9H2M9 1393 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 JCADQ9P266 1359 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 LRRK1Q38SD2 2015 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 PBRM1Q86U86 1689 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 ZBED9Q6R2W3 1325 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 UQCRHLA0A096LP55 91 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 A0A1W2PRD5 423 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 ZNF233A6NK53 670 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 SHISA9B4DS77 424 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 CLDN34H7C241 214 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 SAP18O00422 153 aaKnown RBP3.02□□□□□ -1.93
TDP1-207ENST00000553617 CDX4O14627 284 aaPredicted RBP3.02□□□□□ -1.93
TDP1-207ENST00000553617 BET1O15155 118 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 SLC16A4O15374 487 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 LINC01565O15544 149 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 CXCL13O43927 109 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 SLC19A2O60779 497 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 SUPT3HO75486 399 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 SCRG1O75711 98 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 UGT2B17O75795 530 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 ZMPSTE24O75844 475 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 KBTBD11O94819 623 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 DIRAS1O95057 198 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 GJB5O95377 273 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 UTS2O95399 124 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 SNAP29O95721 258 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 SERPINA1P01009 418 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 TCRBP04435 133 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 IFNW1P05000 195 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 CALB1P05937 261 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 UQCRHP07919 91 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 GUSBP08236 651 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 HOXD4P09016 255 aaPredicted RBP3.02□□□□□ -1.93
TDP1-207ENST00000553617 SLC2A1P11166 492 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 GFAPP14136 432 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms