RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 NAT2P11245 290 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 CCL2P13500 99 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 ZNF32P17041 273 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 ADRA2CP18825 462 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 GPR4P46093 362 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 OMPP47874 163 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 SELENOVP59797 346 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 RAP1BP61224 184 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 RAP1AP62834 184 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 MVKQ03426 396 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 PABPC1L2AQ5JQF8 200 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 RRM2BQ7LG56 351 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 LRRC18Q8N456 261 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 OR1J2Q8NGS2 313 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 NSMAFQ92636 917 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 PYURFQ96I23 114 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 MYEF2Q9P2K5 600 aaKnown RBP10.05□□□□□ -0.8
SRP54-203ENST00000553544 GPR160Q9UJ42 338 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 SIGLEC7Q9Y286 467 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 TMEM5Q9Y2B1 443 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 PPIAL4AQ9Y536 164 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 WNK2Q9Y3S1 2297 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 IGLV3-9A0A075B6K5 115 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 TRBV4-1A0A0J9YWV2 114 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 IQCMA0A1B0GVH7 501 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 A0A1W2PPW3 197 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 AHCYL1O43865 530 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 RP2O75695 350 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 DIRAS1O95057 198 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 CST2P09228 141 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 ZNF250P15622 560 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 PRTN3P24158 256 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 RAD52P43351 418 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 UCP2P55851 309 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 SMIM11AP58511 58 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 FXYD6P3P58550 94 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 ERVK-25P63136 954 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 PSG4Q00888 419 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 TEKQ02763 1124 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 PLP2Q04941 152 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 MAD2L1BPQ15013 274 aaPredicted RBP10.04□□□□□ -0.8
SRP54-203ENST00000553544 SEC23BQ15437 767 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 SGCAQ16586 387 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 TBC1D28Q2M2D7 210 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 RGS7BPQ6MZT1 257 aaPredicted RBP10.04□□□□□ -0.8
SRP54-203ENST00000553544 C22orf15Q8WYQ4 148 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 FAM46AQ96IP4 442 aaKnown RBP10.04□□□□□ -0.8
SRP54-203ENST00000553544 POM121L2Q96KW2 1035 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 LRGUKQ96M69 825 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 Q96M85 177 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 GPX7Q96SL4 187 aaPredicted RBP10.04□□□□□ -0.8
SRP54-203ENST00000553544 GPA33Q99795 319 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 BCL2L14Q9BZR8 327 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 KCNN2Q9H2S1 579 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 UNKLQ9H9P5 680 aaKnown RBP10.04□□□□□ -0.8
SRP54-203ENST00000553544 CDH20Q9HBT6 801 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 NRIP3Q9NQ35 241 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 FZR1Q9UM11 496 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 ADAM18Q9Y3Q7 739 aa10.04□□□□□ -0.8
SRP54-203ENST00000553544 LOC100509620A0A075B734 347 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 ICMTO60725 284 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 CDC14BO60729 498 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 CLPTM1O96005 669 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 SCG5P05408 212 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 FAM157BP0CG42 384 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 LAP3P28838 519 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 MSX2P35548 267 aaPredicted RBP10.03□□□□□ -0.8
SRP54-203ENST00000553544 RPL4P36578 427 aaKnown RBP10.03□□□□□ -0.8
SRP54-203ENST00000553544 CRYBB2P43320 205 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 ENDOGQ14249 297 aaKnown RBP10.03□□□□□ -0.8
SRP54-203ENST00000553544 NKPD1Q17RQ9 610 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 PCGF3Q3KNV8 242 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 MESTQ5EB52 335 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 FGD3Q5JSP0 725 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 AVPI1Q5T686 147 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 TMEM154Q6P9G4 183 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 SYT9Q86SS6 491 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 LRMDAQ9H2I8 198 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 ZMAT3Q9HA38 289 aaKnown RBP10.03□□□□□ -0.8
SRP54-203ENST00000553544 CCNB1IP1Q9NPC3 277 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 HINT3Q9NQE9 182 aaKnown RBP10.03□□□□□ -0.8
SRP54-203ENST00000553544 ACTR3BQ9P1U1 418 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 GRHPRQ9UBQ7 328 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 NOTCH1P46531 2555 aa10.03□□□□□ -0.8
SRP54-203ENST00000553544 PRSS37A4D1T9 235 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 C17orf100A8MU93 164 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 H7C1C5 153 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 ARPC2O15144 300 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 GYG2O15488 501 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 DEAF1O75398 565 aaPredicted RBP10.02□□□□□ -0.81
SRP54-203ENST00000553544 NCR1O76036 304 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 NDUFB2O95178 105 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 TXNDC12O95881 172 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 STOMP27105 288 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 SDHAP31040 664 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 APLNRP35414 380 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 WNT5AP41221 380 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 MAGEB1P43366 347 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 ERVS71-1P61550 626 aa10.02□□□□□ -0.81
SRP54-203ENST00000553544 LCN6P62502 163 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms