RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 TBC1D28Q2M2D7 210 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 ADCK1Q86TW2 530 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 CBR4Q8N4T8 237 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 AKR7LQ8NHP1 331 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 MRPL37Q9BZE1 423 aaKnown RBP20.33■□□□□ 0.85
TDP1-205ENST00000553527 ENOPH1Q9UHY7 261 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 DUSP13Q9UII6 198 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 BAIAP2Q9UQB8 552 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 ORC6Q9Y5N6 252 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 FKBP7Q9Y680 259 aa20.33■□□□□ 0.85
TDP1-205ENST00000553527 CSPG4Q6UVK1 2322 aa20.33■□□□□ 0.84
TDP1-205ENST00000553527 NIPBLQ6KC79 2804 aaeCLIP20.33■□□□□ 0.84
TDP1-205ENST00000553527 IDH3BO43837 385 aa20.32■□□□□ 0.84
TDP1-205ENST00000553527 MGRN1O60291 552 aa20.32■□□□□ 0.84
TDP1-205ENST00000553527 MITFO75030 526 aaPredicted RBP20.32■□□□□ 0.84
TDP1-205ENST00000553527 ADRA2AP08913 450 aa20.32■□□□□ 0.84
TDP1-205ENST00000553527 DSCR9P59020 149 aa20.32■□□□□ 0.84
TDP1-205ENST00000553527 FAM27BQ5VT28 67 aa20.32■□□□□ 0.84
TDP1-205ENST00000553527 LRP11Q86VZ4 500 aa20.32■□□□□ 0.84
TDP1-205ENST00000553527 JAZF1Q86VZ6 243 aa20.32■□□□□ 0.84
TDP1-205ENST00000553527 CPEB3Q8NE35 698 aaKnown RBP20.32■□□□□ 0.84
TDP1-205ENST00000553527 OR10H5Q8NGA6 315 aa20.32■□□□□ 0.84
TDP1-205ENST00000553527 OR1J2Q8NGS2 313 aa20.32■□□□□ 0.84
TDP1-205ENST00000553527 OR4Q3Q8NH05 313 aa20.32■□□□□ 0.84
TDP1-205ENST00000553527 MRPL24Q96A35 216 aaKnown RBP20.32■□□□□ 0.84
TDP1-205ENST00000553527 RAB1BQ9H0U4 201 aa20.32■□□□□ 0.84
TDP1-205ENST00000553527 USE1Q9NZ43 259 aa20.32■□□□□ 0.84
TDP1-205ENST00000553527 TMEFF2Q9UIK5 374 aaPredicted RBP20.32■□□□□ 0.84
TDP1-205ENST00000553527 PRSS37A4D1T9 235 aa20.31■□□□□ 0.84
TDP1-205ENST00000553527 ALPLP05186 524 aa20.31■□□□□ 0.84
TDP1-205ENST00000553527 LCKP06239 509 aa20.31■□□□□ 0.84
TDP1-205ENST00000553527 PPOXP50336 477 aa20.31■□□□□ 0.84
TDP1-205ENST00000553527 ALDH3A2P51648 485 aa20.31■□□□□ 0.84
TDP1-205ENST00000553527 PSG4Q00888 419 aa20.31■□□□□ 0.84
TDP1-205ENST00000553527 SLC35F1Q5T1Q4 408 aa20.31■□□□□ 0.84
TDP1-205ENST00000553527 OTPQ5XKR4 325 aa20.31■□□□□ 0.84
TDP1-205ENST00000553527 SLC27A4Q6P1M0 643 aa20.31■□□□□ 0.84
TDP1-205ENST00000553527 LNX2Q8N448 690 aa20.31■□□□□ 0.84
TDP1-205ENST00000553527 IQCF1Q8N6M8 205 aa20.31■□□□□ 0.84
TDP1-205ENST00000553527 TPK1Q9H3S4 243 aa20.31■□□□□ 0.84
TDP1-205ENST00000553527 C1orf198Q9H425 327 aa20.31■□□□□ 0.84
TDP1-205ENST00000553527 EMC7Q9NPA0 242 aa20.31■□□□□ 0.84
TDP1-205ENST00000553527 YLPM1P49750 1951 aaKnown RBP20.3■□□□□ 0.84
TDP1-205ENST00000553527 SLC16A7O60669 478 aa20.3■□□□□ 0.84
TDP1-205ENST00000553527 SCG5P05408 212 aa20.3■□□□□ 0.84
TDP1-205ENST00000553527 HIST1H1CP16403 213 aaKnown RBP20.3■□□□□ 0.84
TDP1-205ENST00000553527 STOMP27105 288 aa20.3■□□□□ 0.84
TDP1-205ENST00000553527 CENPAP49450 140 aa20.3■□□□□ 0.84
TDP1-205ENST00000553527 CRISP1P54107 249 aa20.3■□□□□ 0.84
TDP1-205ENST00000553527 RPS23P62266 143 aaKnown RBP20.3■□□□□ 0.84
TDP1-205ENST00000553527 ESRRGP62508 458 aa20.3■□□□□ 0.84
TDP1-205ENST00000553527 GINS1Q14691 196 aa20.3■□□□□ 0.84
TDP1-205ENST00000553527 UGT2A3Q6UWM9 527 aa20.3■□□□□ 0.84
TDP1-205ENST00000553527 ZBTB49Q6ZSB9 765 aa20.3■□□□□ 0.84
TDP1-205ENST00000553527 OR4K13Q8NH42 304 aa20.3■□□□□ 0.84
TDP1-205ENST00000553527 SYT4Q9H2B2 425 aa20.3■□□□□ 0.84
TDP1-205ENST00000553527 RRP15Q9Y3B9 282 aaKnown RBP20.3■□□□□ 0.84
TDP1-205ENST00000553527 TLN2Q9Y4G6 2542 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 AHCYL1O43865 530 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 CST2P09228 141 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 CTLA4P16410 223 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 MSR1P21757 451 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 GRK5P34947 590 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 ALDH3B1P43353 468 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 ERVS71-1P61550 626 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 ALKBH6Q3KRA9 238 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 RGS7BPQ6MZT1 257 aaPredicted RBP20.29■□□□□ 0.84
TDP1-205ENST00000553527 LEG1Q6P5S2 330 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 PTCHD4Q6ZW05 846 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 SDR9C7Q8NEX9 313 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 C10orf105Q8TEF2 133 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 ZNF416Q9BWM5 594 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 TEX12Q9BXU0 123 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 RIBC2Q9H4K1 309 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 RNPEPL1Q9HAU8 725 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 SLC25A19Q9HC21 320 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 POLE4Q9NR33 117 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 MYEF2Q9P2K5 600 aaKnown RBP20.29■□□□□ 0.84
TDP1-205ENST00000553527 COA3Q9Y2R0 106 aaPredicted RBP20.29■□□□□ 0.84
TDP1-205ENST00000553527 TIMM10BQ9Y5J6 103 aa20.29■□□□□ 0.84
TDP1-205ENST00000553527 ABCA1O95477 2261 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 C5orf49A4QMS7 147 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 RENP00797 406 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 IFNGP01579 166 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 ERCC1P07992 297 aaPredicted RBP20.28■□□□□ 0.84
TDP1-205ENST00000553527 PEX2P28328 305 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 PCSK6P29122 969 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 CDKN2AP42771 156 aaKnown RBP20.28■□□□□ 0.84
TDP1-205ENST00000553527 RAD52P43351 418 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 GDI2P50395 445 aaKnown RBP20.28■□□□□ 0.84
TDP1-205ENST00000553527 PDLIM4P50479 330 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 RAD23AP54725 363 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 UCP2P55851 309 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 PCBD1P61457 104 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.28■□□□□ 0.84
TDP1-205ENST00000553527 ENDOGQ14249 297 aaKnown RBP20.28■□□□□ 0.84
TDP1-205ENST00000553527 MAD2L1BPQ15013 274 aaPredicted RBP20.28■□□□□ 0.84
TDP1-205ENST00000553527 LPCAT4Q643R3 524 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 FOXL2NBQ6ZUU3 175 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 ALDH16A1Q8IZ83 802 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms