RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 PMS2P3Q13401 168 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 IRF3Q14653 427 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 STK11Q15831 433 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF239Q16600 458 aaKnown RBP4.11□□□□□ -1.75
ATXN3-220ENST00000553491 ZSCAN26Q16670 478 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 C2orf68Q2NKX9 166 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 SLC25A53Q5H9E4 307 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 COQ5Q5HYK3 327 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 C1orf140Q5VVS0 124 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 CARD17Q5XLA6 110 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 AWAT2Q6E213 333 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 ULK3Q6PHR2 472 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 DHRS4L2Q6PKH6 230 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 CASP12Q6UXS9 341 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 AAED1Q7RTV5 226 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 ARPINQ7Z6K5 226 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 GALNT5Q7Z7M9 940 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 HAPLN4Q86UW8 402 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 DEFB107AQ8IZN7 70 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 SLC43A2Q8N370 569 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 NRACQ8N912 160 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 OR8J3Q8NGG0 315 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 OR6T1Q8NGN1 323 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 PIGXQ8TBF5 258 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 TMEM163Q8TC26 289 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 DNAJA4Q8WW22 397 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-220ENST00000553491 RASSF5Q8WWW0 418 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 OIT3Q8WWZ8 545 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 TAAR8Q969N4 342 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 TAMM41Q96BW9 452 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 GMPPAQ96IJ6 420 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-220ENST00000553491 WFIKKN1Q96NZ8 548 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 WFDC6Q9BQY6 131 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 FNDC11Q9BVV2 318 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 C1QTNF6Q9BXI9 259 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 POTEKPQ9BYX7 375 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 RNF122Q9H9V4 155 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 RANGRFQ9HD47 186 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-220ENST00000553491 PLSCR4Q9NRQ2 329 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 GLRX2Q9NS18 164 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 EMC3Q9P0I2 261 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 KLHL9Q9P2J3 617 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 RHCGQ9UBD6 479 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 SLC7A7Q9UM01 511 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 TRAPPC4Q9Y296 219 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 SLC9A8Q9Y2E8 581 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 AP3M1Q9Y2T2 418 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 HDGFL3Q9Y3E1 203 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 FAM32AQ9Y421 112 aaKnown RBP4.11□□□□□ -1.75
ATXN3-220ENST00000553491 CEPT1Q9Y6K0 416 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 RTTNQ86VV8 2226 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 ABCA4P78363 2273 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 TRAV36DV7A0A075B6V5 113 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 IGLV5-39A0A0G2JS06 123 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 A0A1W2PR80 420 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 TRAPPC13A5PLN9 417 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF726A6NNF4 738 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 CYSRT1A8MQ03 144 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 FAM220BPB1ANY3 271 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 BLOC1S5-TXNDC5H3BN57 136 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 NME4O00746 187 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 GPR171O14626 319 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 SMAD9O15198 467 aaKnown RBP4.1□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF208O43345 1280 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 OR2T1O43869 369 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 EIF1BO60739 113 aaKnown RBP4.1□□□□□ -1.75
ATXN3-220ENST00000553491 CYTIPO60759 359 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 RAMP1O60894 148 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 GCM2O75603 506 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-220ENST00000553491 TNFSF13O75888 250 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 LYZL6O75951 148 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 PMS2P2O95744 297 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 FAM107AO95990 144 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 ADORA3P0DMS8 318 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF43P17038 809 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 MYF6P23409 242 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 HTR2AP28223 471 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 PRDX6P30041 224 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 GRPRP30550 384 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 AGTR1P30556 359 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 SSTR2P30874 369 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 RAD52P43351 418 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 GSK3BP49841 420 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 GZMMP51124 257 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 CLDN17P56750 224 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 SELENOWP63302 87 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 SORDQ00796 357 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 VEZF1Q14119 521 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 TWIST1Q15672 202 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 PXDC1Q5TGL8 231 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 DCAF12L2Q5VW00 463 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 AP1ARQ63HQ0 302 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 NIPAL3Q6P499 406 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 TMEM154Q6P9G4 183 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 CCDC80Q76M96 950 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 LINGO2Q7L985 606 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 BHLHA15Q7RTS1 189 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-220ENST00000553491 VTCN1Q7Z7D3 282 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 COMTD1Q86VU5 262 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 CYP4Z1Q86W10 505 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms