RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 IQCF1Q8N6M8 205 aa15.93■□□□□ 0.14
PRPF40B-216ENST00000552301 SLC37A3Q8NCC5 494 aa15.93■□□□□ 0.14
PRPF40B-216ENST00000552301 UTP4Q969X6 686 aaKnown RBP15.93■□□□□ 0.14
PRPF40B-216ENST00000552301 DUS3LQ96G46 650 aaKnown RBP15.93■□□□□ 0.14
PRPF40B-216ENST00000552301 POM121L2Q96KW2 1035 aa15.93■□□□□ 0.14
PRPF40B-216ENST00000552301 CDADC1Q9BWV3 514 aa15.93■□□□□ 0.14
PRPF40B-216ENST00000552301 NTN4Q9HB63 628 aa15.93■□□□□ 0.14
PRPF40B-216ENST00000552301 A0A1W2PPW3 197 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 FAM171A2A8MVW0 826 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 NDUFS7O75251 213 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 GPANK1O95872 356 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 TP53P04637 393 aaPredicted RBP15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 COX5BP10606 129 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 ZNF23P17027 643 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 PYCR1P32322 319 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 PPOXP50336 477 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 UCP2P55851 309 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 TEKQ02763 1124 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 CRMP1Q14194 572 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 MEP1BQ16820 701 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 CLEC12BQ2HXU8 276 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 MST1LQ2TV78 715 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 ARL9Q6T311 187 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 ZDHHC13Q8IUH4 622 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 SLC26A10Q8NG04 563 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 OR9Q1Q8NGQ5 310 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 OR2AJ1Q8NGZ0 328 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 RAB3IPQ96QF0 476 aaPredicted RBP15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 SYT3Q9BQG1 590 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 PAPOLBQ9NRJ5 636 aaKnown RBP15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 CMC2Q9NRP2 79 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 REV1Q9UBZ9 1251 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 DUSP13Q9UII6 198 aa15.92■□□□□ 0.14
PRPF40B-216ENST00000552301 LOC100509620A0A075B734 347 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 M0R233 179 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 SSX4O60224 188 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 ABHD16AO95870 558 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 ZNF823P16415 610 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 PAICSP22234 425 aaKnown RBP15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 ACTR3P61158 418 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 GINS1Q14691 196 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 KPNB1Q14974 876 aaKnown RBP15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 VASH1Q7L8A9 365 aaPredicted RBP15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 AMIGO2Q86SJ2 522 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 C10orf67Q8IYJ2 551 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 GJC3Q8NFK1 279 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 OR1J1Q8NGS3 322 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 OTULINQ96BN8 352 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 PLEKHA8Q96JA3 519 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 TMUB1Q9BVT8 246 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 MRPL37Q9BZE1 423 aaKnown RBP15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 RAB1BQ9H0U4 201 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 ELOVL3Q9HB03 270 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 GPR160Q9UJ42 338 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 KCNG2Q9UJ96 466 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 FZR1Q9UM11 496 aa15.91■□□□□ 0.14
PRPF40B-216ENST00000552301 TEP1Q99973 2627 aaKnown RBP15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 G3V2T6 193 aa15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 HMGN1P05114 100 aa15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 EVX1P49640 407 aa15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 EFNA4P52798 201 aa15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 SLC25A1P53007 311 aa15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 CLEC2AQ6UVW9 174 aa15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 C1orf174Q8IYL3 243 aa15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 OR6K6Q8NGW6 343 aa15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 OR1F12Q8NHA8 337 aa15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 ABHD4Q8TB40 342 aa15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 SYNPRQ8TBG9 265 aa15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 PYDC1Q8WXC3 89 aa15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 LRTOMTQ8WZ04 291 aa15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 DOK1Q99704 481 aa15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 RBM4Q9BWF3 364 aaKnown RBP15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 HDHD2Q9H0R4 259 aa15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.9■□□□□ 0.14
PRPF40B-216ENST00000552301 TRIM64A6NGJ6 449 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 TRIM64BA6NI03 449 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 H7C1Q1 480 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 RER1O15258 196 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 SYNGR3O43761 229 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 TFP02787 698 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 CSF3P09919 207 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 GCH1P30793 250 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 FMO3P31513 532 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 BLVRAP53004 296 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 KLF3P57682 345 aaPredicted RBP15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 ERVS71-1P61550 626 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 DBPQ10586 325 aaPredicted RBP15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 NKPD1Q17RQ9 610 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 MSMPQ1L6U9 139 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 ZFP1Q6P2D0 407 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 FAHD1Q6P587 224 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 CORO6Q6QEF8 472 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 LINC00346Q8IVM7 164 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 OR51L1Q8NGJ5 315 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 SNX33Q8WV41 574 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 CENPNQ96H22 339 aaPredicted RBP15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 C4orf45Q96LM5 186 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 SORCS2Q96PQ0 1159 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 DDOQ99489 341 aa15.89■□□□□ 0.13
PRPF40B-216ENST00000552301 KRT84Q9NSB2 600 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms