RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 RPL22L1Q6P5R6 122 aaKnown RBP4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ANKRD16Q6P6B7 361 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ABHD17CQ6PCB6 329 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 BTNL3Q6UXE8 466 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 TMPPEQ6ZT21 453 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 MED25Q71SY5 747 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 SLC35D2Q76EJ3 337 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 LYG2Q86SG7 212 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 NRROSQ86YC3 692 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 CPOQ8IVL8 374 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF283Q8N7M2 679 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ZSCAN4Q8NAM6 433 aaPredicted RBP4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 MFSD9Q8NBP5 474 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ADPRHL1Q8NDY3 354 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 NOXO1Q8NFA2 376 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 OR4K17Q8NGC6 315 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 OR1N1Q8NGS0 311 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 OR10R2Q8NGX6 335 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 SYNPRQ8TBG9 265 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 RNASE8Q8TDE3 154 aaKnown RBP4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 WFIKKN2Q8TEU8 576 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 SECTM1Q8WVN6 248 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 TMED6Q8WW62 240 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 KCNE4Q8WWG9 221 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 C22orf15Q8WYQ4 148 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 OR5P2Q8WZ92 322 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 SMPDL3BQ92485 455 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 SUSD6Q92537 303 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 HAS2Q92819 552 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 EID2BQ96D98 161 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 OTUB2Q96DC9 234 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 SMIM19Q96E16 107 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 AKR1E2Q96JD6 320 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 AMDHD1Q96NU7 426 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 CAMK1GQ96NX5 476 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 DERL3Q96Q80 235 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 CNN2Q99439 309 aaKnown RBP4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 PYGO2Q9BRQ0 406 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 NDC1Q9BTX1 674 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 SUCNR1Q9BXA5 334 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ADGRE3Q9BY15 652 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 NMES1Q9C002 83 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 SELENOIQ9C0D9 397 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ATG5Q9H1Y0 275 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 HIPK2Q9H2X6 1198 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 POFUT1Q9H488 388 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 DPEP2Q9H4A9 486 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 CXorf36Q9H7Y0 433 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 CNTD2Q9H8S5 307 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 TRPV4Q9HBA0 871 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ADGRL4Q9HBW9 690 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 Q9N2J8 555 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 TRPC4Q9UBN4 977 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 UPB1Q9UBR1 384 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 VAX2Q9UIW0 290 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF223Q9UK11 482 aaPredicted RBP4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 OR52A1Q9UKL2 312 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 AK6Q9Y3D8 172 aaKnown RBP4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 ADAM18Q9Y3Q7 739 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 V9GYS6 101 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 PATJQ8NI35 1801 aa4.76□□□□□ -1.65
LSM3P2-201ENST00000551246 TRBV5-7A0A0A0MS05 114 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 TRBV5-5A0A0J9YX44 114 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 TCRBV21S2A2A0A5A6 115 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 DAPL1A0PJW8 107 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 GXYLT2A0PJZ3 443 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 DUXAA6NLW8 204 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 CEACAM18A8MTB9 384 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 ETV2O00321 342 aaPredicted RBP4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 HMGN4O00479 90 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 BHLHE40O14503 412 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 CA11O75493 328 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 LYPD3O95274 346 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 OR2C1O95371 312 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 SLC2A10O95528 541 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 DIRAS3O95661 229 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 IGLV3-27P01718 113 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 AMBPP02760 352 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 ARG1P05089 322 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 CLUP10909 449 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 PGAM2P15259 253 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF7P17097 686 aaPredicted RBP4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 ADRA2CP18825 462 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 SRMP19623 302 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 TBPP20226 339 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 BCKDHBP21953 392 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 CD34P28906 385 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 APLNRP35414 380 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 RGRP47804 291 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 CX3CR1P49238 355 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 PGFP49763 221 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 OR12D2P58182 307 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 FXYD6P3P58550 94 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 RPS20P60866 119 aaKnown RBP4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 ACTC1P68032 377 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 ACTA1P68133 377 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 FAM3AP98173 230 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 SP3Q02447 781 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 ACSM2AQ08AH3 577 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 TWF1Q12792 350 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms