RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 FGFBP3Q8TAT2 258 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 TMEM170AQ8WVE7 144 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 CHMP6Q96FZ7 201 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 ITCHQ96J02 903 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 COG8Q96MW5 612 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 ZNF583Q96ND8 569 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 CGREF1Q99674 301 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 PIP5K1AQ99755 562 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 POTEKPQ9BYX7 375 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 KLHL4Q9C0H6 718 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 FANCFQ9NPI8 374 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 MEPEQ9NQ76 525 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-214ENST00000550893 GLRX2Q9NS18 164 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 EXD2Q9NVH0 621 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 CMTM6Q9NX76 183 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 NKIRAS1Q9NYS0 192 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 P2RX2Q9UBL9 471 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 KCNG2Q9UJ96 466 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 MCTS1Q9ULC4 181 aaKnown RBP4.18□□□□□ -1.74
SCAF11-214ENST00000550893 LIPT1Q9Y234 373 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 TRAPPC4Q9Y296 219 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 HDGFL3Q9Y3E1 203 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 NBEAL1Q6ZS30 2694 aa4.18□□□□□ -1.74
SCAF11-214ENST00000550893 IGLV5-37A0A075B6J1 123 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 IGKV1D-43A0A0B4J1Z2 117 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 A0A0G2JPF8 293 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 OR5H1A6NKK0 313 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 HNRNPCL2B2RXH8 293 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 HNRNPCL3B7ZW38 293 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 SULT2B1O00204 365 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 NME4O00746 187 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 HS3ST1O14792 307 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 FFAR1O14842 300 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 POLR3GO15318 223 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-214ENST00000550893 PIP5K1CO60331 668 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 HNRNPCL1O60812 293 aaKnown RBP4.17□□□□□ -1.74
SCAF11-214ENST00000550893 RAD51DO75771 328 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 NUDT14O95848 222 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 LGI1O95970 557 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 CH25HO95992 272 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 AGR2O95994 175 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 IGLV1-44P01699 117 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 HNRNPCL4P0DMR1 293 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 NR2F1P10589 423 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 DAOP14920 347 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 ANOS1P23352 680 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 AQP1P29972 269 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 CALCRP30988 508 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 PEX19P40855 299 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 CRATP43155 626 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 CRISP3P54108 245 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 UGT2B15P54855 530 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 FXYD6P3P58550 94 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 IRX1P78414 480 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-214ENST00000550893 CDK6Q00534 326 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 RUNX1T1Q06455 604 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 ITGADQ13349 1161 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 CEACAM7Q14002 265 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 SCARB2Q14108 478 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 SF3B4Q15427 424 aaKnown RBP eCLIP4.17□□□□□ -1.748e-9■■■□□ 16.8
SCAF11-214ENST00000550893 ACKR1Q16570 336 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 TRMT5Q32P41 509 aaKnown RBP4.17□□□□□ -1.74
SCAF11-214ENST00000550893 ZNF672Q499Z4 452 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-214ENST00000550893 LIN52Q52LA3 116 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 HIKESHIQ53FT3 197 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 BEX5Q5H9J7 111 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 GCNT6Q5T4J0 391 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 C1orf140Q5VVS0 124 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 FBXW9Q5XUX1 488 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 REP15Q6BDI9 236 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 NANOGP8Q6NSW7 305 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 BHLHB9Q6PI77 547 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 CCDC80Q76M96 950 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 BHLHA15Q7RTS1 189 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-214ENST00000550893 PRSS45Q7RTY3 260 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 ZNF584Q8IVC4 421 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 KIRREL3Q8IZU9 778 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 FAM86B1Q8N7N1 296 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 ZNF611Q8N823 705 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 ZNF114Q8NC26 417 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 RBM15BQ8NDT2 890 aaKnown RBP4.17□□□□□ -1.74
SCAF11-214ENST00000550893 BBS10Q8TAM1 723 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 LRRC8CQ8TDW0 803 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 HTRA1Q92743 480 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 BCL2L2Q92843 193 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-214ENST00000550893 SLC38A4Q969I6 547 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 SLC35B4Q969S0 331 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 MUS81Q96NY9 551 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 ALKBH3Q96Q83 286 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-214ENST00000550893 SEPHS2Q99611 448 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 FUZQ9BT04 418 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 MED18Q9BUE0 208 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 TRAF4Q9BUZ4 470 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-214ENST00000550893 MTHFD2LQ9H903 347 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-214ENST00000550893 NANOGQ9H9S0 305 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 UBTD1Q9HAC8 227 aa4.17□□□□□ -1.74
SCAF11-214ENST00000550893 INTS9Q9NV88 658 aaKnown RBP4.17□□□□□ -1.74
SCAF11-214ENST00000550893 BEX4Q9NWD9 120 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-214ENST00000550893 PAQR5Q9NXK6 330 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-214ENST00000550893 TMEM181Q9P2C4 612 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms