RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 CSF1P09603 554 aa12.79□□□□□ -0.36
CACNB3-209ENST00000548860 ACSM4P0C7M7 580 aa12.79□□□□□ -0.36
CACNB3-209ENST00000548860 EPHA4P54764 986 aa12.79□□□□□ -0.36
CACNB3-209ENST00000548860 CAMK2BQ13554 666 aa12.79□□□□□ -0.36
CACNB3-209ENST00000548860 ARSKQ6UWY0 536 aa12.79□□□□□ -0.36
CACNB3-209ENST00000548860 OR2AK2Q8NG84 335 aa12.79□□□□□ -0.36
CACNB3-209ENST00000548860 PIGTQ969N2 578 aa12.79□□□□□ -0.36
CACNB3-209ENST00000548860 LINC00052Q96N35 136 aa12.79□□□□□ -0.36
CACNB3-209ENST00000548860 OR52A1Q9UKL2 312 aa12.79□□□□□ -0.36
CACNB3-209ENST00000548860 LAMA1P25391 3075 aa12.79□□□□□ -0.36
CACNB3-209ENST00000548860 A0A0A6YYH2 397 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 A6NJ64 397 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 MASP2O00187 686 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 ZNF43P17038 809 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 RBM34P42696 430 aaKnown RBP12.78□□□□□ -0.36
CACNB3-209ENST00000548860 ACTBP60709 375 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 ACTG1P63261 375 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 CDONQ4KMG0 1287 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 EXOSC6Q5RKV6 272 aaKnown RBP12.78□□□□□ -0.36
CACNB3-209ENST00000548860 STPG1Q5TH74 334 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 DNM1P34Q6PK57 102 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 GABRG1Q8N1C3 465 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 TMEM234Q8WY98 164 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 ST8SIA4Q92187 359 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 MMP17Q9ULZ9 603 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 B3GALT1Q9Y5Z6 326 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 A0A0G2JK05 382 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 ATP6V1G2-DDX39BF2Z307 99 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 TNFRSF10CO14798 259 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 KLF4O43474 513 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 PNPP00491 289 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 MRPS21P82921 87 aaKnown RBP12.78□□□□□ -0.36
CACNB3-209ENST00000548860 TMEM81Q6P7N7 255 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 BRICD5Q6PL45 260 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 RTL10Q7L3V2 364 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 RNASE11Q8TAA1 199 aaKnown RBP12.78□□□□□ -0.36
CACNB3-209ENST00000548860 MR1Q95460 341 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 MIB2Q96AX9 1013 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 HAVCR1Q96D42 359 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 VRK1Q99986 396 aaPredicted RBP12.78□□□□□ -0.36
CACNB3-209ENST00000548860 TRAV36DV7A0A075B6V5 113 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 FAM230AA0A1W2PPH8 454 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 NSA2O95478 260 aaKnown RBP12.78□□□□□ -0.36
CACNB3-209ENST00000548860 TMEM225BP0DP42 221 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 RPL27P61353 136 aaKnown RBP12.78□□□□□ -0.36
CACNB3-209ENST00000548860 CSNK2A1P68400 391 aaPredicted RBP12.78□□□□□ -0.36
CACNB3-209ENST00000548860 C2orf68Q2NKX9 166 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 PAPD4Q6PIY7 484 aaKnown RBP12.78□□□□□ -0.36
CACNB3-209ENST00000548860 CSNK2A3Q8NEV1 391 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 ZNF75AQ96N20 296 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 RTN4RQ9BZR6 473 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 TTC28Q96AY4 2481 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 COL4A4P53420 1690 aaPredicted RBP12.78□□□□□ -0.36
CACNB3-209ENST00000548860 MEIKINA0A087WXM9 373 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 TRAV1-2A0A0B4J238 106 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 HSPB6O14558 160 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 HSD17B7P56937 341 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 EFNB1P98172 346 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 SRYQ05066 204 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 GALNT16Q8N428 558 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 OR51T1Q8NGJ9 327 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 OR1J4Q8NGS1 313 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 OR10R2Q8NGX6 335 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 SERINC1Q9NRX5 453 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 LRP12Q9Y561 859 aa12.78□□□□□ -0.36
CACNB3-209ENST00000548860 PRSS37A4D1T9 235 aa12.77□□□□□ -0.36
CACNB3-209ENST00000548860 NUDT21O43809 227 aaKnown RBP12.77□□□□□ -0.36
CACNB3-209ENST00000548860 PRAF2O60831 178 aa12.77□□□□□ -0.36
CACNB3-209ENST00000548860 ABCD3P28288 659 aa12.77□□□□□ -0.36
CACNB3-209ENST00000548860 CAPZBP47756 277 aa12.77□□□□□ -0.36
CACNB3-209ENST00000548860 FOXK1P85037 733 aa12.77□□□□□ -0.36
CACNB3-209ENST00000548860 MGAT2Q10469 447 aa12.77□□□□□ -0.36
CACNB3-209ENST00000548860 KLF9Q13886 244 aaPredicted RBP12.77□□□□□ -0.36
CACNB3-209ENST00000548860 SLC17A1Q14916 467 aa12.77□□□□□ -0.36
CACNB3-209ENST00000548860 RNLSQ5VYX0 342 aa12.77□□□□□ -0.36
CACNB3-209ENST00000548860 PLXDC1Q8IUK5 500 aa12.77□□□□□ -0.36
CACNB3-209ENST00000548860 SLX1AQ9BQ83 275 aa12.77□□□□□ -0.36
CACNB3-209ENST00000548860 LSM5Q9Y4Y9 91 aaKnown RBP12.77□□□□□ -0.36
CACNB3-209ENST00000548860 TANC1Q9C0D5 1861 aa12.77□□□□□ -0.36
CACNB3-209ENST00000548860 NXPH3O95157 252 aa12.77□□□□□ -0.37
CACNB3-209ENST00000548860 CSTBP04080 98 aaKnown RBP12.77□□□□□ -0.37
CACNB3-209ENST00000548860 PPP3CBP16298 524 aa12.77□□□□□ -0.37
CACNB3-209ENST00000548860 STT3BQ8TCJ2 826 aa12.77□□□□□ -0.37
CACNB3-209ENST00000548860 KCNJ15Q99712 375 aa12.77□□□□□ -0.37
CACNB3-209ENST00000548860 RNF215Q9Y6U7 377 aa12.77□□□□□ -0.37
CACNB3-209ENST00000548860 LOC100289279A0A1B0GTE1 492 aa12.77□□□□□ -0.37
CACNB3-209ENST00000548860 NAP1L6A6NFF2 107 aa12.77□□□□□ -0.37
CACNB3-209ENST00000548860 CXCL2P19875 107 aa12.77□□□□□ -0.37
CACNB3-209ENST00000548860 C1orf53Q5VUE5 145 aa12.77□□□□□ -0.37
CACNB3-209ENST00000548860 ZNF485Q8NCK3 441 aa12.77□□□□□ -0.37
CACNB3-209ENST00000548860 OR6M1Q8NGM8 313 aa12.77□□□□□ -0.37
CACNB3-209ENST00000548860 RGP1Q92546 391 aaPredicted RBP12.77□□□□□ -0.37
CACNB3-209ENST00000548860 SLC46A1Q96NT5 459 aa12.77□□□□□ -0.37
CACNB3-209ENST00000548860 APMAPQ9HDC9 416 aa12.77□□□□□ -0.37
CACNB3-209ENST00000548860 OBP2AQ9NY56 170 aa12.77□□□□□ -0.37
CACNB3-209ENST00000548860 A0A1W2PPC4 97 aa12.76□□□□□ -0.37
CACNB3-209ENST00000548860 OGG1O15527 345 aa12.76□□□□□ -0.37
CACNB3-209ENST00000548860 ZNF208O43345 1280 aa12.76□□□□□ -0.37
CACNB3-209ENST00000548860 IGHV4-34P06331 123 aa12.76□□□□□ -0.37
CACNB3-209ENST00000548860 VSIG10L2P0DP72 767 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms