RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 MEGF11A6BM72 1044 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 NUDT21O43809 227 aaKnown RBP20.81■□□□□ 0.92
NPAS3-206ENST00000548645 PNPP00491 289 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 F12P00748 615 aaPredicted RBP20.81■□□□□ 0.92
NPAS3-206ENST00000548645 CRHP06850 196 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 ABOP16442 354 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 FSTP19883 344 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 ARRB1P49407 418 aaPredicted RBP20.81■□□□□ 0.92
NPAS3-206ENST00000548645 PNLIPRP3Q17RR3 467 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 MOGAT2Q3SYC2 334 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 OR4A4PQ8NGN8 299 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 RXFP4Q8TDU9 374 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 C2CD4CQ8TF44 421 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 CASTOR1Q8WTX7 329 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 DCUN1D4Q92564 292 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 GDE1Q9NZC3 331 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 LDLRAD4O15165 306 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 CD37P11049 281 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 IGFBP3P17936 291 aaPredicted RBP20.81■□□□□ 0.92
NPAS3-206ENST00000548645 EGR4Q05215 589 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 KLHL26Q53HC5 615 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 CCL4L1Q8NHW4 92 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 PPP1R14AQ96A00 147 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 RNF208Q9H0X6 261 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 STARD5Q9NSY2 213 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 CSAG2Q9Y5P2 127 aa20.81■□□□□ 0.92
NPAS3-206ENST00000548645 DCDC2BA2VCK2 349 aa20.8■□□□□ 0.92
NPAS3-206ENST00000548645 FITM1A5D6W6 292 aa20.8■□□□□ 0.92
NPAS3-206ENST00000548645 C5orf51A6NDU8 294 aa20.8■□□□□ 0.92
NPAS3-206ENST00000548645 OR2W5A6NFC9 320 aa20.8■□□□□ 0.92
NPAS3-206ENST00000548645 VAMP1P23763 118 aa20.8■□□□□ 0.92
NPAS3-206ENST00000548645 SLC18B1Q6NT16 456 aa20.8■□□□□ 0.92
NPAS3-206ENST00000548645 CORO6Q6QEF8 472 aa20.8■□□□□ 0.92
NPAS3-206ENST00000548645 SLC25A44Q96H78 314 aaPredicted RBP20.8■□□□□ 0.92
NPAS3-206ENST00000548645 NUDT9Q9BW91 350 aa20.8■□□□□ 0.92
NPAS3-206ENST00000548645 MYEF2Q9P2K5 600 aaKnown RBP20.8■□□□□ 0.92
NPAS3-206ENST00000548645 STK17BO94768 372 aa20.8■□□□□ 0.92
NPAS3-206ENST00000548645 PJVKQ0ZLH3 352 aa20.8■□□□□ 0.92
NPAS3-206ENST00000548645 PTX4Q96A99 478 aa20.8■□□□□ 0.92
NPAS3-206ENST00000548645 ASB16Q96NS5 453 aa20.8■□□□□ 0.92
NPAS3-206ENST00000548645 CENPAP49450 140 aa20.79■□□□□ 0.92
NPAS3-206ENST00000548645 TSC22D1Q15714 1073 aa20.79■□□□□ 0.92
NPAS3-206ENST00000548645 PARGQ86W56 976 aa20.79■□□□□ 0.92
NPAS3-206ENST00000548645 JAGN1Q8N5M9 183 aa20.79■□□□□ 0.92
NPAS3-206ENST00000548645 TMED6Q8WW62 240 aa20.79■□□□□ 0.92
NPAS3-206ENST00000548645 CCDC3Q9BQI4 270 aa20.79■□□□□ 0.92
NPAS3-206ENST00000548645 SELENOIQ9C0D9 397 aa20.79■□□□□ 0.92
NPAS3-206ENST00000548645 MEX3AA1L020 520 aaKnown RBP20.79■□□□□ 0.92
NPAS3-206ENST00000548645 LINC01387J3KSC0 135 aa20.79■□□□□ 0.92
NPAS3-206ENST00000548645 XKRYO14609 159 aa20.79■□□□□ 0.92
NPAS3-206ENST00000548645 KCNAB3O43448 404 aa20.79■□□□□ 0.92
NPAS3-206ENST00000548645 DUS4LO95620 317 aaKnown RBP20.79■□□□□ 0.92
NPAS3-206ENST00000548645 LSSP48449 732 aa20.79■□□□□ 0.92
NPAS3-206ENST00000548645 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.79■□□□□ 0.92
NPAS3-206ENST00000548645 ZNF776Q68DI1 518 aaPredicted RBP20.79■□□□□ 0.92
NPAS3-206ENST00000548645 OR10K2Q6IF99 312 aa20.79■□□□□ 0.92
NPAS3-206ENST00000548645 AQP3Q92482 292 aa20.79■□□□□ 0.92
NPAS3-206ENST00000548645 KTI12Q96EK9 354 aaPredicted RBP20.79■□□□□ 0.92
NPAS3-206ENST00000548645 TMEM231Q9H6L2 316 aa20.79■□□□□ 0.92
NPAS3-206ENST00000548645 TRBV6-7A0A0A0MS04 114 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 METTL21EPA6NDL7 271 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 ERCC1P07992 297 aaPredicted RBP20.78■□□□□ 0.92
NPAS3-206ENST00000548645 KCTD18Q6PI47 426 aaPredicted RBP20.78■□□□□ 0.92
NPAS3-206ENST00000548645 FJX1Q86VR8 437 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 OR9A4Q8NGU2 314 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 CDC6Q99741 560 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 TBC1D3DA0A087WVF3 549 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 C13orf42A0A1B0GVH6 325 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 CPED1A4D0V7 1026 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 TBC1D3LB9A6J9 549 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 PLRG1O43660 514 aaKnown RBP20.78■□□□□ 0.92
NPAS3-206ENST00000548645 OR6A2O95222 327 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 TBC1D3HP0C7X1 549 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 HPGDP15428 266 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 DNASE1L1P49184 302 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 CYCSP99999 105 aaKnown RBP20.78■□□□□ 0.92
NPAS3-206ENST00000548645 TBC1D3CQ6IPX1 549 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 DRAM2Q6UX65 266 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 TBC1D3Q8IZP1 549 aaPredicted RBP20.78■□□□□ 0.92
NPAS3-206ENST00000548645 ZFP82Q8N141 532 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 PAQR4Q8N4S7 273 aaPredicted RBP20.78■□□□□ 0.92
NPAS3-206ENST00000548645 MRGPRFQ96AM1 343 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 WBP1LQ9NX94 342 aa20.78■□□□□ 0.92
NPAS3-206ENST00000548645 A0A0B4J2A0 478 aa20.77■□□□□ 0.92
NPAS3-206ENST00000548645 C2orf74A8MZ97 194 aa20.77■□□□□ 0.92
NPAS3-206ENST00000548645 GJA4P35212 333 aa20.77■□□□□ 0.92
NPAS3-206ENST00000548645 CTNNB1P35222 781 aa20.77■□□□□ 0.92
NPAS3-206ENST00000548645 RIDAP52758 137 aaKnown RBP20.77■□□□□ 0.92
NPAS3-206ENST00000548645 ROM1Q03395 351 aa20.77■□□□□ 0.92
NPAS3-206ENST00000548645 OTPQ5XKR4 325 aa20.77■□□□□ 0.92
NPAS3-206ENST00000548645 TRAPPC6BQ86SZ2 158 aa20.77■□□□□ 0.92
NPAS3-206ENST00000548645 ACBD4Q8NC06 268 aa20.77■□□□□ 0.92
NPAS3-206ENST00000548645 C16orf52Q8NHV5 167 aa20.77■□□□□ 0.92
NPAS3-206ENST00000548645 PHOSPHO1Q8TCT1 267 aa20.77■□□□□ 0.92
NPAS3-206ENST00000548645 ELF4Q99607 663 aaPredicted RBP20.77■□□□□ 0.92
NPAS3-206ENST00000548645 ZNF304Q9HCX3 659 aa20.77■□□□□ 0.92
NPAS3-206ENST00000548645 SHPKQ9UHJ6 478 aa20.77■□□□□ 0.92
NPAS3-206ENST00000548645 EDARQ9UNE0 448 aa20.77■□□□□ 0.92
NPAS3-206ENST00000548645 POM121BA6NF01 834 aa20.77■□□□□ 0.92
NPAS3-206ENST00000548645 EFSO43281 561 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms