RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 F12P00748 615 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-206ENST00000547764 LCKP06239 509 aa16.1■□□□□ 0.17
PRPF40B-206ENST00000547764 WNT5AP41221 380 aa16.1■□□□□ 0.17
PRPF40B-206ENST00000547764 EVX1P49640 407 aa16.1■□□□□ 0.17
PRPF40B-206ENST00000547764 ERVS71-1P61550 626 aa16.1■□□□□ 0.17
PRPF40B-206ENST00000547764 GLO1Q04760 184 aa16.1■□□□□ 0.17
PRPF40B-206ENST00000547764 RGS7BPQ6MZT1 257 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-206ENST00000547764 ZNF101Q8IZC7 436 aa16.1■□□□□ 0.17
PRPF40B-206ENST00000547764 SLC37A3Q8NCC5 494 aa16.1■□□□□ 0.17
PRPF40B-206ENST00000547764 SLC26A10Q8NG04 563 aa16.1■□□□□ 0.17
PRPF40B-206ENST00000547764 COX4I2Q96KJ9 171 aa16.1■□□□□ 0.17
PRPF40B-206ENST00000547764 BCL2L14Q9BZR8 327 aa16.1■□□□□ 0.17
PRPF40B-206ENST00000547764 FBXO9Q9UK97 447 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-206ENST00000547764 H3BN98 237 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 EBAG9O00559 213 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 DOK2O60496 412 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 TFP02787 698 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 INHBBP09529 407 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 COX5BP10606 129 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 ANXA8P13928 327 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 ARHGDIAP52565 204 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 SHQ1Q6PI26 577 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 VASH1Q7L8A9 365 aaPredicted RBP16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 ZCCHC24Q8N2G6 241 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 ICA1LQ8NDH6 482 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 TEX47Q8TBZ9 253 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 NRBF2Q96F24 287 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 DUS3LQ96G46 650 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 ZNF556Q9HAH1 456 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 DYNLRB1Q9NP97 96 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 PLEK2Q9NYT0 353 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 MYEF2Q9P2K5 600 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 EIF3KQ9UBQ5 218 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 DUSP13Q9UII6 198 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 KLHL21Q9UJP4 597 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 NDRG4Q9ULP0 352 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 POLR1DQ9Y2S0 133 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 AP4S1Q9Y587 144 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 LHFPL6Q9Y693 200 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 MTORP42345 2549 aa16.09■□□□□ 0.17
PRPF40B-206ENST00000547764 SMAD7O15105 426 aaKnown RBP16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 RER1O15258 196 aa16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 SYNGR3O43761 229 aa16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 ADRA2AP08913 450 aa16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 PYCR1P32322 319 aa16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 HTR5AP47898 357 aa16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 TEKQ02763 1124 aa16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 CRMP1Q14194 572 aa16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 ATP6AP1Q15904 470 aa16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 CCDC92Q53HC0 331 aaPredicted RBP16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 IQCF1Q8N6M8 205 aa16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 ZNF525Q8N782 197 aa16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 ATG16L2Q8NAA4 619 aa16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 OR1J1Q8NGS3 322 aa16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 OR2T4Q8NH00 348 aa16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 ZNRF4Q8WWF5 429 aa16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 SMR3AQ99954 134 aa16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 RBM4Q9BWF3 364 aaKnown RBP16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 RAB1BQ9H0U4 201 aa16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 GSX1Q9H4S2 264 aaPredicted RBP16.08■□□□□ 0.16
PRPF40B-206ENST00000547764 ICMTO60725 284 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 CLPTM1O96005 669 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 HLA-DQA2P01906 255 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 OSMP13725 252 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 ZNF250P15622 560 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 POU1F1P28069 291 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 HIST1H3AP68431 136 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 HIST2H3PS2Q5TEC6 136 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 CORO6Q6QEF8 472 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 CLEC2AQ6UVW9 174 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 HIST2H3AQ71DI3 136 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 PROKR2Q8NFJ6 384 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 GJC3Q8NFK1 279 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 OR10H5Q8NGA6 315 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 OR9Q1Q8NGQ5 310 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 SYNPRQ8TBG9 265 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 C4orf45Q96LM5 186 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 RHNO1Q9BSD3 238 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 NMNAT2Q9BZQ4 307 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 CMC2Q9NRP2 79 aa16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 MRPL22Q9NWU5 206 aaKnown RBP16.07■□□□□ 0.16
PRPF40B-206ENST00000547764 IGLV3-9A0A075B6K5 115 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 IGHV4-30-2A0A087WSY4 118 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 A0A1W2PPW3 197 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 OR6C6A6NF89 314 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 RIIAD1A6NNX1 92 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 RNF223E7ERA6 249 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 M0R233 179 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 NGFP01138 241 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 IFNGP01579 166 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 FASP25445 335 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 GRK5P34947 590 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 ALDH3B1P43353 468 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 KLF3P57682 345 aaPredicted RBP16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 DSCR9P59020 149 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 GINS1Q14691 196 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 MAD2L1BPQ15013 274 aaPredicted RBP16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 SPATA46Q5T0L3 261 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 ACSM5Q6NUN0 579 aa16.06■□□□□ 0.16
PRPF40B-206ENST00000547764 SLC27A4Q6P1M0 643 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms