RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 SYNGR3O43761 229 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 GLCEO94923 617 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 GPANK1O95872 356 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 SOD3P08294 240 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 ZNF823P16415 610 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 TUBG1P23258 451 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 APEX1P27695 318 aaKnown RBP12.5□□□□□ -0.41
DDX54-203ENST00000546869 RAD52P43351 418 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 EVX1P49640 407 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 GDI2P50395 445 aaKnown RBP12.5□□□□□ -0.41
DDX54-203ENST00000546869 FABP6P51161 128 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 RAD23AP54725 363 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 RPS23P62266 143 aaKnown RBP12.5□□□□□ -0.41
DDX54-203ENST00000546869 GALK2Q01415 458 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 EFNB3Q15768 340 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 SNAPC1Q16533 368 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 MEP1BQ16820 701 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 CCDC92Q53HC0 331 aaPredicted RBP12.5□□□□□ -0.41
DDX54-203ENST00000546869 SLC35D3Q5M8T2 416 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 ZNF774Q6NX45 483 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 UNQ6126/PRO20091Q6UXV3 157 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 VASH1Q7L8A9 365 aaPredicted RBP12.5□□□□□ -0.41
DDX54-203ENST00000546869 FBXL14Q8N1E6 418 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 OR9Q1Q8NGQ5 310 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 AKR7LQ8NHP1 331 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 PLEKHA8Q96JA3 519 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 CDADC1Q9BWV3 514 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 HCAR1Q9BXC0 346 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 BCL2L14Q9BZR8 327 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 CXorf56Q9H5V9 222 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 CDH20Q9HBT6 801 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 TUBG2Q9NRH3 451 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 ZNF701Q9NV72 531 aaPredicted RBP12.5□□□□□ -0.41
DDX54-203ENST00000546869 TVP23BQ9NYZ1 205 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 LAMP3Q9UQV4 416 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 ROS1P08922 2347 aa12.5□□□□□ -0.41
DDX54-203ENST00000546869 FAM171A2A8MVW0 826 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 B9A039 149 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 EI24O14681 340 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 HLA-DQA2P01906 255 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 EPHA2P29317 976 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 PYCR1P32322 319 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 SERPINF1P36955 418 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 UCP2P55851 309 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 ECH1Q13011 328 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 RAB35Q15286 201 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 ADIPOQQ15848 244 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 SWI5Q1ZZU3 235 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 MST1LQ2TV78 715 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 ELFN2Q5R3F8 820 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 C11orf71Q6IPW1 123 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 SLC18B1Q6NT16 456 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 ARL9Q6T311 187 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 ZBTB49Q6ZSB9 765 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 RHOUQ7L0Q8 258 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 CPOQ8IVL8 374 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 CBR4Q8N4T8 237 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 OR2AJ1Q8NGZ0 328 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 DCLRE1CQ96SD1 692 aaKnown RBP12.49□□□□□ -0.41
DDX54-203ENST00000546869 COQ7Q99807 217 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 GSX2Q9BZM3 304 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 HDHD2Q9H0R4 259 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 HINT3Q9NQE9 182 aaKnown RBP12.49□□□□□ -0.41
DDX54-203ENST00000546869 C8orf4Q9NR00 106 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 PLEK2Q9NYT0 353 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 ORC6Q9Y5N6 252 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 LRBAP50851 2863 aa12.49□□□□□ -0.41
DDX54-203ENST00000546869 C5orf49A4QMS7 147 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 FAM183AA6NL82 134 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 ANKRD65E5RJM6 399 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 J3QW42 95 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 RER1O15258 196 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 DOK2O60496 412 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 BAG2O95816 211 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 GYPBP06028 91 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 OR4A8P0C604 315 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 CLUP10909 449 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 BMP4P12644 408 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 ANPEPP15144 967 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 SLC2A5P22732 501 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 THBS4P35443 961 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 POLR2IP36954 125 aaKnown RBP12.48□□□□□ -0.41
DDX54-203ENST00000546869 ENTPD1P49961 510 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 ADAM8P78325 824 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 SNTB2Q13425 540 aaKnown RBP12.48□□□□□ -0.41
DDX54-203ENST00000546869 TESK1Q15569 626 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 KRTAP27-1Q3LI81 207 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 KRT80Q6KB66 452 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 PLBD1Q6P4A8 553 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 CXXC5Q7LFL8 322 aaKnown RBP12.48□□□□□ -0.41
DDX54-203ENST00000546869 PAQR4Q8N4S7 273 aaPredicted RBP12.48□□□□□ -0.41
DDX54-203ENST00000546869 OR51L1Q8NGJ5 315 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 OR1F12Q8NHA8 337 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 TRUB1Q8WWH5 349 aaKnown RBP12.48□□□□□ -0.41
DDX54-203ENST00000546869 EME1Q96AY2 570 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 HRASLS5Q96KN8 279 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 SLC29A1Q99808 456 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 ELOVL3Q9HB03 270 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 TBCCD1Q9NVR7 557 aa12.48□□□□□ -0.41
DDX54-203ENST00000546869 EIF3KQ9UBQ5 218 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms