RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 SERPINB12Q96P63 405 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 TBL1YQ9BQ87 522 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 GON7Q9BXV9 100 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 ING4Q9UNL4 249 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 UBIAD1Q9Y5Z9 338 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 IKBKGQ9Y6K9 419 aa1.63□□□□□ -2.15
CCDC38-204ENST00000546816 OR6C74A6NCV1 312 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 FOXE1O00358 373 aaPredicted RBP1.62□□□□□ -2.15
CCDC38-204ENST00000546816 ZNF688P0C7X2 276 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 MX1P20591 662 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 PTMSP20962 102 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 DCKP27707 260 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 VSX2P58304 361 aaPredicted RBP1.62□□□□□ -2.15
CCDC38-204ENST00000546816 YWHAGP61981 247 aaKnown RBP eCLIP1.62□□□□□ -2.15
CCDC38-204ENST00000546816 MXD1Q05195 221 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 GK3PQ14409 553 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 METTL21CQ5VZV1 264 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 H3F3CQ6NXT2 135 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 SLC16A13Q7RTY0 426 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 EID2Q8N6I1 236 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 SPANXA2-OT1Q8N9U9 137 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 ZNF606Q8WXB4 792 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 NT5C3BQ969T7 300 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 ZBTB18Q99592 522 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 ROPN1BQ9BZX4 212 aaPredicted RBP1.62□□□□□ -2.15
CCDC38-204ENST00000546816 EXOSC4Q9NPD3 245 aaKnown RBP1.62□□□□□ -2.15
CCDC38-204ENST00000546816 HYPKQ9NX55 129 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 KLHL28Q9NXS3 571 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 NUP50Q9UKX7 468 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 GOLT1BQ9Y3E0 138 aa1.62□□□□□ -2.15
CCDC38-204ENST00000546816 VGLL3A8MV65 326 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 F6UB75 175 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 UBXN8O00124 270 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 FGGP02679 453 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 P0C880 135 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 ZNF735P0CB33 412 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 RAB3AP20336 220 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 CCNA1P78396 465 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 ADARB1P78563 741 aaKnown RBP1.61□□□□□ -2.15
CCDC38-204ENST00000546816 CDH17Q12864 832 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 IFT88Q13099 833 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 ZSCAN26Q16670 478 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 SNX20Q7Z614 316 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 OR1L6Q8NGR2 347 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 OR2A1Q8NGT9 310 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 OR13G1Q8NGZ3 307 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 PTX4Q96A99 478 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 TIMM17AQ99595 171 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 CWH43Q9H720 699 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 VANGL2Q9ULK5 521 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 ASB3Q9Y575 518 aa1.61□□□□□ -2.15
CCDC38-204ENST00000546816 ANKRD12Q6UB98 2062 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 AKNAQ7Z591 1439 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 SHANK1Q9Y566 2161 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 IGHV3OR16-8A0A075B7F1 116 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 IGKV2-24A0A0C4DH68 120 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 BTBD17A6NE02 478 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 DNASE2O00115 360 aaPredicted RBP1.6□□□□□ -2.15
CCDC38-204ENST00000546816 CHST10O43529 356 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 DPM1O60762 260 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 IGHDP01880 384 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 OR5H8P0DN80 308 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 CRADDP78560 199 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 BST2Q10589 180 aaKnown RBP1.6□□□□□ -2.15
CCDC38-204ENST00000546816 TGFBIQ15582 683 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 PTPN20Q4JDL3 420 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 CEP55Q53EZ4 464 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 FAM222AQ5U5X8 452 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 KDELC1Q6UW63 502 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 TMEM205Q6UW68 189 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 CERS6Q6ZMG9 384 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 MS4A15Q8N5U1 240 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 METTL13Q8N6R0 699 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 LRRC52Q8N7C0 313 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 SPATA4Q8NEY3 305 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 OR2L3Q8NG85 312 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 OR13C2Q8NGS9 318 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 OR6N1Q8NGY5 312 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 PLPPR1Q8TBJ4 325 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 ILKAPQ9H0C8 392 aaPredicted RBP1.6□□□□□ -2.15
CCDC38-204ENST00000546816 OR52D1Q9H346 318 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 COX16Q9P0S2 106 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 CBY1Q9Y3M2 126 aa1.6□□□□□ -2.15
CCDC38-204ENST00000546816 ZNF816-ZNF321PA0A0X1KG74 233 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 ZNF716A6NP11 495 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 C16orf90A8MZG2 172 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 H0YJW9 148 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 REM1O75628 298 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 NDUFB10O96000 172 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 SERPIND1P05546 499 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 CTSLP07711 333 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 CD3GP09693 182 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 TNFSF9P41273 254 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 CCNHP51946 323 aaPredicted RBP1.59□□□□□ -2.15
CCDC38-204ENST00000546816 SYNJ2BPP57105 145 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 PLP1P60201 277 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 BST1Q10588 318 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 ZMYND11Q15326 602 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 MAJINQ3KP22 176 aa1.59□□□□□ -2.15
CCDC38-204ENST00000546816 SAXO2Q658L1 398 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms