RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 AKR7LQ8NHP1 331 aa13.11□□□□□ -0.31
SSH1-204ENST00000546697 UBASH3BQ8TF42 649 aa13.11□□□□□ -0.31
SSH1-204ENST00000546697 FOXN4Q96NZ1 517 aa13.11□□□□□ -0.31
SSH1-204ENST00000546697 SYT3Q9BQG1 590 aa13.11□□□□□ -0.31
SSH1-204ENST00000546697 DYNLRB1Q9NP97 96 aa13.11□□□□□ -0.31
SSH1-204ENST00000546697 IL20RAQ9UHF4 553 aa13.11□□□□□ -0.31
SSH1-204ENST00000546697 CUBNO60494 3623 aa13.11□□□□□ -0.31
SSH1-204ENST00000546697 A0A1W2PPL8 197 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 C17orf100A8MU93 164 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 INAFM1C9JVW0 142 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 TNFRSF11BO00300 401 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 SOCS2O14508 198 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 PPP1R3DO95685 299 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 CLPTM1O96005 669 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 FAM157BP0CG42 384 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 HIST1H1CP16403 213 aaKnown RBP13.1□□□□□ -0.31
SSH1-204ENST00000546697 ZNF23P17027 643 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 MMP15P51511 669 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 SELENOVP59797 346 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 ERVS71-1P61550 626 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 COX10Q12887 443 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 MICAQ29983 383 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 DNAL1Q4LDG9 190 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 TMEM255AQ5JRV8 349 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 FAM209AQ5JX71 171 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 C6orf52Q5T4I8 152 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 ZNF774Q6NX45 483 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 VASH1Q7L8A9 365 aaPredicted RBP13.1□□□□□ -0.31
SSH1-204ENST00000546697 OR6V1Q8N148 313 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 LNX2Q8N448 690 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 PAPD5Q8NDF8 572 aaKnown RBP13.1□□□□□ -0.31
SSH1-204ENST00000546697 NPEPL1Q8NDH3 523 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 SLC26A10Q8NG04 563 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 HPS1Q92902 700 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 ERMAPQ96PL5 475 aaPredicted RBP13.1□□□□□ -0.31
SSH1-204ENST00000546697 DCLRE1CQ96SD1 692 aaKnown RBP13.1□□□□□ -0.31
SSH1-204ENST00000546697 BPESC1Q9GZL8 116 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 ELOVL3Q9HB03 270 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 VNN3Q9NY84 501 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 B9D1Q9UPM9 204 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 COA3Q9Y2R0 106 aaPredicted RBP13.1□□□□□ -0.31
SSH1-204ENST00000546697 MXRA5Q9NR99 2828 aa13.1□□□□□ -0.31
SSH1-204ENST00000546697 IGHV4-61A0A0C4DH41 118 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 C5orf49A4QMS7 147 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 SGCEO43556 437 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 LILRA1O75019 489 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 RP2O75695 350 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 UBOX5O94941 541 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 GASTP01350 101 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 TP53P04637 393 aaPredicted RBP13.09□□□□□ -0.31
SSH1-204ENST00000546697 IGHV4-31P0DP07 118 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 ACHEP22303 614 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 LIPAP38571 399 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 GZMKP49863 264 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 ZNF718Q3SXZ3 478 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 CCDC92Q53HC0 331 aaPredicted RBP13.09□□□□□ -0.31
SSH1-204ENST00000546697 ARL9Q6T311 187 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 RFPL4BQ6ZWI9 263 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 HIPK1Q86Z02 1210 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 OR9Q2Q8NGE9 314 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 OR1J1Q8NGS3 322 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 KLF14Q8TD94 323 aaPredicted RBP13.09□□□□□ -0.31
SSH1-204ENST00000546697 CLPTM1LQ96KA5 538 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 C4orf45Q96LM5 186 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 SAMD8Q96LT4 415 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 NMNAT3Q96T66 252 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 CHODLQ9H9P2 273 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 EMC7Q9NPA0 242 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 HINT3Q9NQE9 182 aaKnown RBP13.09□□□□□ -0.31
SSH1-204ENST00000546697 EIF3KQ9UBQ5 218 aaKnown RBP13.09□□□□□ -0.31
SSH1-204ENST00000546697 LHFPL6Q9Y693 200 aa13.09□□□□□ -0.31
SSH1-204ENST00000546697 OR6C68A6NDL8 312 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 NCR1O76036 304 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 CCNB2O95067 398 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 HPXP02790 462 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 GSTM3P21266 225 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 ALDH3B1P43353 468 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 TMEM33P57088 247 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 PPP2R2BQ00005 443 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 GLO1Q04760 184 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 COLCA1Q6ZS62 124 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 GJC3Q8NFK1 279 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 OR8D4Q8NGM9 314 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 RDH5Q92781 318 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 COG8Q96MW5 612 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 TSSK2Q96PF2 358 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 COQ7Q99807 217 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 THTPAQ9BU02 230 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 IFT27Q9BW83 186 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 PLA2G12AQ9BZM1 189 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 NMNAT2Q9BZQ4 307 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 HDHD2Q9H0R4 259 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 CYSLTR2Q9NS75 346 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 TAAR3PQ9P1P4 343 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 ASH2LQ9UBL3 628 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 DUSP13Q9UII6 198 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 KCNG2Q9UJ96 466 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 BAIAP2Q9UQB8 552 aa13.08□□□□□ -0.32
SSH1-204ENST00000546697 A0A1B0GWJ7 208 aa13.07□□□□□ -0.32
SSH1-204ENST00000546697 TCRBV3S1A0A5B6 114 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms