RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 CLDN18P56856 261 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 ACTC1P68032 377 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 ACTA1P68133 377 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 BDH1Q02338 343 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 PMS2P3Q13401 168 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 RAB39AQ14964 217 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 OR7A5Q15622 319 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 ACKR1Q16570 336 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 PCK2Q16822 640 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 CDONQ4KMG0 1287 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 FAM209BQ5JX69 171 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 LCN1P1Q5VSP4 162 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 RAET1LQ5VY80 246 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 LINC00696Q6ZRV3 163 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 ADGRE4PQ86SQ3 457 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 SLC22A16Q86VW1 577 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 TMEM251Q8N6I4 163 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 NANOGP1Q8N7R0 232 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 BBS1Q8NFJ9 593 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 OR52I1Q8NGK6 324 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 OR52N1Q8NH53 320 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 OR6X1Q8NH79 312 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 TM9SF4Q92544 642 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 CPNE4Q96A23 557 aaPredicted RBP7.48□□□□□ -1.21
VPS29-203ENST00000546588 Q96M85 177 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 C5orf34Q96MH7 638 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 OXGR1Q96P68 337 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 ALG12Q9BV10 488 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 HES7Q9BYE0 225 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 LDAHQ9H6V9 325 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 ADGRL4Q9HBW9 690 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 GRHPRQ9UBQ7 328 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 ZNF346Q9UL40 294 aaKnown RBP7.48□□□□□ -1.21
VPS29-203ENST00000546588 EXOSC1Q9Y3B2 195 aaKnown RBP7.48□□□□□ -1.21
VPS29-203ENST00000546588 CEPT1Q9Y6K0 416 aa7.48□□□□□ -1.21
VPS29-203ENST00000546588 CELSR3Q9NYQ7 3312 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 IGLV1-36A0A0B4J1U3 117 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 A0A0J9YW62 118 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 A0A1W2PRG6 482 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 PRSS37A4D1T9 235 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 ZNF716A6NP11 495 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 HSPB2A8KAH6 182 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 ZNF99A8MXY4 864 aaPredicted RBP7.47□□□□□ -1.21
VPS29-203ENST00000546588 ZNF879B4DU55 563 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 ZNF814B7Z6K7 855 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 PTGES3LE9PB15 166 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 SULT2B1O00204 365 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 SMAD9O15198 467 aaKnown RBP7.47□□□□□ -1.21
VPS29-203ENST00000546588 GMFGO60234 142 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 CYTIPO60759 359 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 ZNF432O94892 652 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 PGA4P0DJD7 388 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 PGA3P0DJD8 388 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 GAAP10253 952 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 GTF2E2P29084 291 aaKnown RBP7.47□□□□□ -1.21
VPS29-203ENST00000546588 RPL4P36578 427 aaKnown RBP7.47□□□□□ -1.21
VPS29-203ENST00000546588 TGFBR2P37173 567 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 NUP62P37198 522 aaPredicted RBP7.47□□□□□ -1.21
VPS29-203ENST00000546588 PLA2G5P39877 138 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 MAGEA5P43359 124 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 TMBIM6P55061 237 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 ERVK-25P63136 954 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 ARG2P78540 354 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 HSF1Q00613 529 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 HSF2Q03933 536 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 SLC17A1Q14916 467 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 TSC22D1Q15714 1073 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 HSPB2Q16082 182 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 ZNF674Q2M3X9 581 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 RGS21Q2M5E4 152 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 TMEM176BQ3YBM2 270 aaPredicted RBP7.47□□□□□ -1.21
VPS29-203ENST00000546588 GXYLT1Q4G148 440 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 MEX3BQ6ZN04 569 aaKnown RBP7.47□□□□□ -1.21
VPS29-203ENST00000546588 FOXL2NBQ6ZUU3 175 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 TRILQ7L0X0 811 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 BCDIN3DQ7Z5W3 292 aaKnown RBP7.47□□□□□ -1.21
VPS29-203ENST00000546588 SATL1Q86VE3 508 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 SIAH3Q8IW03 269 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 TIGD4Q8IY51 512 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 STX19Q8N4C7 294 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 TMEM99Q8N816 258 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 SDR9C7Q8NEX9 313 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 OR52E2Q8NGJ4 325 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 OR14L1PQ8NHC6 308 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 NEIL3Q8TAT5 605 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 ZPLD1Q8TCW7 415 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 RPS4Y2Q8TD47 263 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 RNF128Q8TEB7 428 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 TMEM45BQ96B21 275 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 TMIGD2Q96BF3 282 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 RASD2Q96D21 266 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 YIPF6Q96EC8 236 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 TMEM68Q96MH6 324 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 NMNAT3Q96T66 252 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 MND1Q9BWT6 205 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 KLHL1Q9NR64 748 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 TAS2R3Q9NYW6 316 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 PLA2G3Q9NZ20 509 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 RCE1Q9Y256 329 aa7.47□□□□□ -1.21
VPS29-203ENST00000546588 A0A0G2JNJ9 132 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms