RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 HINT3Q9NQE9 182 aaKnown RBP10.14□□□□□ -0.79
HDAC4-216ENST00000544989 CYSLTR2Q9NS75 346 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 NKIRAS2Q9NYR9 191 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 TAAR3PQ9P1P4 343 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 IL20RAQ9UHF4 553 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 BAIAP2Q9UQB8 552 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 POLR1DQ9Y2S0 133 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 CDH10Q9Y6N8 788 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 DOK2O60496 412 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 PPP1R3DO95685 299 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 IGHV3-13P01766 116 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 ACHEP22303 614 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 ALDH3B1P43353 468 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 RGS6P49758 472 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 RASSF2P50749 326 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 TEKQ02763 1124 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 ZNF774Q6NX45 483 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 LEG1Q6P5S2 330 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 RASSF6Q6ZTQ3 369 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 PTCHD4Q6ZW05 846 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 MAPK1IP1LQ8NDC0 245 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 ICA1LQ8NDH6 482 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 GJC3Q8NFK1 279 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 RDH5Q92781 318 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 HPS1Q92902 700 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 C4orf45Q96LM5 186 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 DCLRE1CQ96SD1 692 aaKnown RBP10.13□□□□□ -0.79
HDAC4-216ENST00000544989 THTPAQ9BU02 230 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 NUAK2Q9H093 628 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 RERGLQ9H628 205 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 CHODLQ9H9P2 273 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 TBCCD1Q9NVR7 557 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 PLEK2Q9NYT0 353 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 IL20Q9NYY1 176 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 KCNG2Q9UJ96 466 aa10.13□□□□□ -0.79
HDAC4-216ENST00000544989 COA3Q9Y2R0 106 aaPredicted RBP10.13□□□□□ -0.79
HDAC4-216ENST00000544989 SAMHD1Q9Y3Z3 626 aaKnown RBP10.13□□□□□ -0.79
HDAC4-216ENST00000544989 ANK3Q12955 4377 aaKnown RBP10.13□□□□□ -0.79
HDAC4-216ENST00000544989 LOC100509620A0A075B734 347 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 PLSCR5A0PG75 271 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 ARRDC5A6NEK1 342 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 OR6C6A6NF89 314 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 C17orf100A8MU93 164 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 A8MV72 311 aaPredicted RBP10.12□□□□□ -0.79
HDAC4-216ENST00000544989 LY6HO94772 140 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 ABHD16AO95870 558 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 ZNF23P17027 643 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 CDKN2AP42771 156 aaKnown RBP10.12□□□□□ -0.79
HDAC4-216ENST00000544989 HTR5AP47898 357 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 CENPAP49450 140 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 CHN2P52757 468 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 TMEM33P57088 247 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 MS4A2Q01362 244 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 KRTAP1-1Q07627 177 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 COX10Q12887 443 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 GGTLC2Q14390 218 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 MSMPQ1L6U9 139 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 MICAQ29983 383 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 ZBTB46Q86UZ6 589 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 LRP11Q86VZ4 500 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 OR4C15Q8NGM1 316 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 ABHD4Q8TB40 342 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 SAMD8Q96LT4 415 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 FOXN4Q96NZ1 517 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 DIRC2Q96SL1 478 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 BTBD10Q9BSF8 475 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 DGCR6LQ9BY27 220 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 HDHD2Q9H0R4 259 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 OR51B6Q9H340 312 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 TPK1Q9H3S4 243 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 EMC7Q9NPA0 242 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 TMEM160Q9NX00 188 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 FZR1Q9UM11 496 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 B9D1Q9UPM9 204 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 ANK2Q01484 3957 aa10.12□□□□□ -0.79
HDAC4-216ENST00000544989 CR1P17927 2039 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 DHRS12A0PJE2 317 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 INAFM1C9JVW0 142 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 ACOT8O14734 319 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 CRLF1O75462 422 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 DNAJC8O75937 253 aaPredicted RBP10.11□□□□□ -0.79
HDAC4-216ENST00000544989 ATP5HO75947 161 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 UBOX5O94941 541 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 CST1P01037 141 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 HIST1H1CP16403 213 aaKnown RBP10.11□□□□□ -0.79
HDAC4-216ENST00000544989 WNT5AP41221 380 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 PPP1CBP62140 327 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 ECH1Q13011 328 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 RIN1Q13671 783 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 FLOT2Q14254 428 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 C6orf52Q5T4I8 152 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 ZNF770Q6IQ21 691 aaPredicted RBP10.11□□□□□ -0.79
HDAC4-216ENST00000544989 CD300LDQ6UXZ3 194 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 VASH1Q7L8A9 365 aaPredicted RBP10.11□□□□□ -0.79
HDAC4-216ENST00000544989 ZCCHC24Q8N2G6 241 aaKnown RBP10.11□□□□□ -0.79
HDAC4-216ENST00000544989 AQP11Q8NBQ7 271 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 OR5L1Q8NGL2 311 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 OR2T4Q8NH00 348 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 OR4K13Q8NH42 304 aa10.11□□□□□ -0.79
HDAC4-216ENST00000544989 OR1F12Q8NHA8 337 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms