RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 TNFSF11O14788 317 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 M6PRP20645 277 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 HSD17B11Q8NBQ5 300 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 BARHL1Q9BZE3 327 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 GPR84Q9NQS5 396 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 M0R135 149 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 HOXD12P35452 270 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 DGCR2P98153 550 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 AKR1C1Q04828 323 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 DEFB109BQ30KR1 87 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 ZNF799Q96GE5 643 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 POFUT1Q9H488 388 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 ISG20L2Q9H9L3 353 aaKnown RBP11.64□□□□□ -0.55
CHD4-211ENST00000544484 C5orf49A4QMS7 147 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 SHISA8B8ZZ34 492 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 CLDN15P56746 228 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 CD300LGQ6UXG3 332 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 TRILQ7L0X0 811 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 LIMS2Q7Z4I7 341 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 SFTPA1Q8IWL2 248 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 OR1M1Q8NGA1 313 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 EDEM2Q9BV94 578 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 TAS2R5Q9NYW4 299 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 B3GAT1Q9P2W7 334 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 STRCQ7RTU9 1775 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 FER1L6Q2WGJ9 1857 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 FAM221AA4D161 298 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 TMEM235A6NFC5 223 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 CPEP16870 476 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 SERPINF1P36955 418 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 RBP2P50120 134 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 FAM199XQ6PEV8 388 aaPredicted RBP11.64□□□□□ -0.55
CHD4-211ENST00000544484 OVCH1Q7RTY7 1134 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 UBALD2Q8IYN6 164 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 TP53I13Q8NBR0 393 aaPredicted RBP11.64□□□□□ -0.55
CHD4-211ENST00000544484 OR51F2Q8NH61 342 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 EID2BQ96D98 161 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 MRGPRX3Q96LB0 322 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 CDCA4Q9BXL8 241 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 DUSP21Q9H596 190 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 PRSS37A4D1T9 235 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 FABP5Q01469 135 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 ANKRD16Q6P6B7 361 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 MDGA2Q7Z553 956 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 NECAP2Q9NVZ3 263 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 NUP214P35658 2090 aaPredicted RBP11.64□□□□□ -0.55
CHD4-211ENST00000544484 FUCA1P04066 466 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 NDUFB7P17568 137 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 PNLIPRP2P54317 469 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 TAS2R30P59541 319 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 BAXQ07812 192 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 FOXF1Q12946 379 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 OR10K2Q6IF99 312 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 LPCAT3Q6P1A2 487 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 DEFB108BQ8NET1 73 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 ROBO4Q8WZ75 1007 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 SLCO5A1Q9H2Y9 848 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 PRDM7Q9NQW5 492 aa11.64□□□□□ -0.55
CHD4-211ENST00000544484 PUS1Q9Y606 427 aaKnown RBP eCLIP11.64□□□□□ -0.55
CHD4-211ENST00000544484 TMEM265A0A087WTH1 108 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 FAM157BP0CG42 384 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 NKX6-1P78426 367 aaPredicted RBP11.63□□□□□ -0.55
CHD4-211ENST00000544484 FAAP20Q6NZ36 180 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 ZNF793Q6ZN11 406 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 GDPD3Q7L5L3 318 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 FJX1Q86VR8 437 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 ST8SIA1Q92185 356 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 NDUFB11Q9NX14 153 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 ANKRD34BA5PLL1 514 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 ALOX5APP20292 161 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 LAP3P28838 519 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 NKG7Q16617 165 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 THEM4Q5T1C6 240 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 PRSS41Q7RTY9 318 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 C11orf40Q8WZ69 217 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 BCO1Q9HAY6 547 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 EXO1Q9UQ84 846 aaKnown RBP11.63□□□□□ -0.55
CHD4-211ENST00000544484 KLF13Q9Y2Y9 288 aaPredicted RBP11.63□□□□□ -0.55
CHD4-211ENST00000544484 TIMM10BQ9Y5J6 103 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 CISD3P0C7P0 127 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 OR8G1Q15617 311 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 RDH5Q92781 318 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 NUDT9Q9BW91 350 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 SULT1C2O00338 296 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 FKBP2P26885 142 aaKnown RBP11.63□□□□□ -0.55
CHD4-211ENST00000544484 EMC4Q5J8M3 183 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 EGFL6Q8IUX8 553 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 OR5H6Q8NGV6 325 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 ALG14Q96F25 216 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 KIRREL1Q96J84 757 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 OPALINQ96PE5 141 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 OR2A14Q96R47 310 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 SIGLEC11Q96RL6 698 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 ARPC5LQ9BPX5 153 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 GMDSO60547 372 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 CRYZL1O95825 349 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 CHRM2P08172 466 aa11.63□□□□□ -0.55
CHD4-211ENST00000544484 ZNF133P52736 654 aaPredicted RBP11.63□□□□□ -0.55
CHD4-211ENST00000544484 DUS3LQ96G46 650 aaKnown RBP11.63□□□□□ -0.55
CHD4-211ENST00000544484 TMEM9BQ9NQ34 198 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms