RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 C1orf198Q9H425 327 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 WDR76Q9H967 626 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 ORC6Q9Y5N6 252 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 E9PQ18 207 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 SGCEO43556 437 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 GLCEO94923 617 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 SNAP29O95721 258 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 SOD3P08294 240 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 DANCRP0C864 163 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 SLC2A5P22732 501 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 FMO3P31513 532 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 APLNRP35414 380 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 ADAM8P78325 824 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 NKX6-1P78426 367 aaPredicted RBP13.04□□□□□ -0.32
CD9-210ENST00000543916 EFNB1P98172 346 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 KEAP1Q14145 624 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 TRIP10Q15642 601 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 LPCAT4Q643R3 524 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 CFAP77Q6ZQR2 320 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 TCEANCQ8N8B7 351 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 NUP37Q8NFH4 326 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 OR4F15Q8NGB8 312 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 SMAP2Q8WU79 429 aaPredicted RBP13.04□□□□□ -0.32
CD9-210ENST00000543916 DHRS9Q9BPW9 319 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 PRRG3Q9BZD7 231 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 TOR3AQ9H497 397 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 CDH20Q9HBT6 801 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 CYB5R1Q9UHQ9 305 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 CSMD1Q96PZ7 3565 aa13.04□□□□□ -0.32
CD9-210ENST00000543916 TEX15Q9BXT5 2789 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 C5orf49A4QMS7 147 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 OR6C6A6NF89 314 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 PRODHO43272 600 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 SYNGR3O43761 229 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 CD8AP01732 235 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 COX5BP10606 129 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 ZNF823P16415 610 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 NR4A1P22736 598 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 PEX2P28328 305 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 THBS4P35443 961 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 HTR5AP47898 357 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 FABP6P51161 128 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 SNTB2Q13425 540 aaKnown RBP13.03□□□□□ -0.32
CD9-210ENST00000543916 LRRC36Q1X8D7 754 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 KLHL12Q53G59 568 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 VHLLQ6RSH7 139 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 BCDIN3DQ7Z5W3 292 aaKnown RBP13.03□□□□□ -0.32
CD9-210ENST00000543916 ALDH16A1Q8IZ83 802 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 OR1J2Q8NGS2 313 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 TMEM163Q8TC26 289 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 ZMYND19Q96E35 227 aaPredicted RBP13.03□□□□□ -0.32
CD9-210ENST00000543916 IL4I1Q96RQ9 567 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 CCL19Q99731 98 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 GRIP2Q9C0E4 1043 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 DCLRE1BQ9H816 532 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 MARCH7Q9H992 704 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 CA10Q9NS85 328 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 PLEK2Q9NYT0 353 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 NKX1-2Q9UD57 310 aaPredicted RBP13.03□□□□□ -0.32
CD9-210ENST00000543916 KCNG2Q9UJ96 466 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 GDF2Q9UK05 429 aaPredicted RBP13.03□□□□□ -0.32
CD9-210ENST00000543916 DSCAMO60469 2012 aa13.03□□□□□ -0.32
CD9-210ENST00000543916 CCDC182A6NF36 153 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 DLGAP1O14490 977 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 TLX2O43763 284 aaPredicted RBP13.02□□□□□ -0.33
CD9-210ENST00000543916 GPRIN2O60269 458 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 CCNOP22674 350 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 DNASE1P24855 282 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 GSTT1P30711 240 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 TTKP33981 857 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 WNT5AP41221 380 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 ENTPD1P49961 510 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 GDI2P50395 445 aaKnown RBP13.02□□□□□ -0.33
CD9-210ENST00000543916 BLVRAP53004 296 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 GALK2Q01415 458 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 APOFQ13790 326 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 RAB35Q15286 201 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 ADIPOQQ15848 244 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 PCK2Q16822 640 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 MSMPQ1L6U9 139 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 ZNF544Q6NX49 715 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 DTX2Q86UW9 622 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 TIGD4Q8IY51 512 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 GJC3Q8NFK1 279 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 OR10S1Q8NGN2 331 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 OR2AJ1Q8NGZ0 328 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 SLC7A6Q92536 515 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 NINJ1Q92982 152 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 MAP6Q96JE9 813 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 HRASLS5Q96KN8 279 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 INTS14Q96SY0 518 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 TRAF4Q9BUZ4 470 aaPredicted RBP13.02□□□□□ -0.33
CD9-210ENST00000543916 CDADC1Q9BWV3 514 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 OR51B6Q9H340 312 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 PNRC2Q9NPJ4 139 aaKnown RBP13.02□□□□□ -0.33
CD9-210ENST00000543916 LAMP3Q9UQV4 416 aa13.02□□□□□ -0.33
CD9-210ENST00000543916 ZNF593O00488 134 aaPredicted RBP13.01□□□□□ -0.33
CD9-210ENST00000543916 CASQ2O14958 399 aaPredicted RBP13.01□□□□□ -0.33
CD9-210ENST00000543916 SPARCP09486 303 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 FAM157BP0CG42 384 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms