RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 TMEM233B4DJY2 109 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 NRG2O14511 850 aaPredicted RBP8.05□□□□□ -1.12
VPS13D-212ENST00000543766 WDR1O75083 606 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 CER1O95813 267 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 CD22P20273 847 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 PRR5P85299 388 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 TEAD2Q15562 447 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 GLT8D1Q68CQ7 371 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 DPY19L4Q7Z388 723 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 UBE3DQ7Z6J8 389 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 GTPBP8Q8N3Z3 284 aaPredicted RBP8.05□□□□□ -1.12
VPS13D-212ENST00000543766 OR4S1Q8NGB4 309 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 CYP2W1Q8TAV3 490 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 SLC39A7Q92504 469 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 WDR89Q96FK6 387 aaPredicted RBP8.05□□□□□ -1.12
VPS13D-212ENST00000543766 PEBP4Q96S96 227 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 TMEM106CQ9BVX2 250 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 CNTNAP3Q9BZ76 1288 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 ACKR4Q9NPB9 350 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 SLC23A2Q9UGH3 650 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 LOC285556D6RIA3 1793 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 SMCHD1A6NHR9 2005 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 FAM230AA0A1W2PPH8 454 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 TRUB2O95900 331 aaKnown RBP8.05□□□□□ -1.12
VPS13D-212ENST00000543766 EDN1P05305 212 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 LAMP1P11279 417 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 TNFSF8P32971 234 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 CXCR3P49682 368 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 DOK7Q18PE1 504 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 DEFB115Q30KQ5 88 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 NHLRC3Q5JS37 347 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 ESRP1Q6NXG1 681 aaKnown RBP8.05□□□□□ -1.12
VPS13D-212ENST00000543766 ZNF555Q8NEP9 628 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 SORCS1Q8WY21 1168 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 OR8D1Q8WZ84 308 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 GHSRQ92847 366 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 MRGPRX2Q96LB1 330 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 TSSK2Q96PF2 358 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 PITX2Q99697 317 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 SGK2Q9HBY8 427 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 AMDHD2Q9Y303 409 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 WDR27A2RRH5 827 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 COLCA2A8K830 154 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 C9orf172C9J069 976 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 GLP2RO95838 553 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 S1PR4O95977 384 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 HAND1O96004 215 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 PGA3P0DJD8 388 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 CYB561P49447 251 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 C1QTNF8P60827 252 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 RPL24P83731 157 aaKnown RBP8.05□□□□□ -1.12
VPS13D-212ENST00000543766 PAX5Q02548 391 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 ACVR1Q04771 509 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 SRSF1Q07955 248 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS13D-212ENST00000543766 MESP2Q0VG99 397 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 MAPK14Q16539 360 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 LARP4Q71RC2 724 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS13D-212ENST00000543766 PRICKLE2Q7Z3G6 844 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 NIT1Q86X76 327 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 TMEM204Q9BSN7 226 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 TLNRD1Q9H1K6 362 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 TNFRSF12AQ9NP84 129 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 SPHK2Q9NRA0 654 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 V9GYH0 126 aa8.05□□□□□ -1.12
VPS13D-212ENST00000543766 ISM1B1AKI9 464 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 OR6A2O95222 327 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 ANOS1P23352 680 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 TIGD5Q53EQ6 642 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 XKR7Q5GH72 579 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 OR2T2Q6IF00 324 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 RHBDD2Q6NTF9 364 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 NCEH1Q6PIU2 408 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 ASCL4Q6XD76 172 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 GATSQ8NAP1 163 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 GPR148Q8TDV2 347 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 C1GALT1C1Q96EU7 318 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 HDAC8Q9BY41 377 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 TMEM134Q9H6X4 195 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 IL23AQ9NPF7 189 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 SEMA4BQ9NPR2 832 aaPredicted RBP8.04□□□□□ -1.12
VPS13D-212ENST00000543766 HSPB7Q9UBY9 170 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 A0A1B0GUS0 222 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 M0R082 166 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 CTSVO60911 334 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 IGHV2-5P01817 119 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 ADH5P11766 374 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 SOAT1P35610 550 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 SLC19A1P41440 591 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 RANP62826 216 aaKnown RBP8.04□□□□□ -1.12
VPS13D-212ENST00000543766 ABRAXAS2Q15018 415 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 PGGHGQ32M88 737 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 IDNKQ5T6J7 187 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 TMEM71Q6P5X7 295 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 GDF7Q7Z4P5 450 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 OR6T1Q8NGN1 323 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 JOSD2Q8TAC2 188 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 PRMT6Q96LA8 375 aaPredicted RBP8.04□□□□□ -1.12
VPS13D-212ENST00000543766 NPY6RQ99463 290 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 DERL1Q9BUN8 251 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 SELENOIQ9C0D9 397 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms