RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	DNAH7	Q8WXX0	4024 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	ARFGEF3	Q5TH69	2177 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	IGHV4-30-2	A0A087WSY4	118 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	IGKV3D-15	A0A087WSY6	115 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	LCE6A	A0A183	80 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	5.63	□□□□□ -1.51
CIT-213	ENST00000543324	RPS10-NUDT3	A0A1W2PQS6	291 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	CASK	O14936	926 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	SMAD9	O15198	467 aa	Known RBP	5.63	□□□□□ -1.51
CIT-213	ENST00000543324	ZNF264	O43296	627 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	ORC5	O43913	435 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	GMFG	O60234	142 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	FCMR	O60667	390 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	SNAPC5	O75971	98 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	ZNF682	O95780	498 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	COX5A	P20674	150 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	CBL	P22681	906 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	CFL1	P23528	166 aa	Known RBP	5.63	□□□□□ -1.51
CIT-213	ENST00000543324	PSMA1	P25786	263 aa	Known RBP	5.63	□□□□□ -1.51
CIT-213	ENST00000543324	S100A3	P33764	101 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	PCGF2	P35227	344 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	MVD	P53602	400 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	RAC3	P60763	192 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	CDC42	P60953	191 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	B2M	P61769	119 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	SNRPG	P62308	76 aa	Known RBP	5.63	□□□□□ -1.51
CIT-213	ENST00000543324	IL1RL1	Q01638	556 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	RNPS1	Q15287	305 aa	Known RBP	5.63	□□□□□ -1.51
CIT-213	ENST00000543324	MAPK14	Q16539	360 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	AANAT	Q16613	207 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	TATDN3	Q17R31	274 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	GTDC1	Q4AE62	458 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	ZMAT1	Q5H9K5	638 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	PDZK1	Q5T2W1	519 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	DDI2	Q5TDH0	399 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	HACD4	Q5VWC8	232 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	HBM	Q6B0K9	141 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	TYW3	Q6IPR3	259 aa	Known RBP	5.63	□□□□□ -1.51
CIT-213	ENST00000543324	ADAM5	Q6NVV9	412 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	C3orf33	Q6P1S2	294 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	TMEM65	Q6PI78	240 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	TEX261	Q6UWH6	196 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	FAM131A	Q6UXB0	335 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	FRRS1	Q6ZNA5	592 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	BEND4	Q6ZU67	534 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	CHMP1B	Q7LBR1	199 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	NUFIP2	Q7Z417	695 aa	Known RBP	5.63	□□□□□ -1.51
CIT-213	ENST00000543324	SZRD1	Q7Z422	152 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	C6orf120	Q7Z4R8	191 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	PTOV1	Q86YD1	416 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	LAX1	Q8IWV1	398 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	C10orf111	Q8N326	155 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	OR10G2	Q8NGC3	310 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	OR9Q1	Q8NGQ5	310 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	LILRB1	Q8NHL6	650 aa	Predicted RBP	5.63	□□□□□ -1.51
CIT-213	ENST00000543324	PHOSPHO1	Q8TCT1	267 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	ADAMTS15	Q8TE58	950 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	ST8SIA1	Q92185	356 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	AP3S1	Q92572	193 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	AKAP1	Q92667	903 aa	Known RBP eCLIP	5.63	□□□□□ -1.51
CIT-213	ENST00000543324	OSTF1	Q92882	214 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	UBE2F	Q969M7	185 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	CREB3L1	Q96BA8	519 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	SORCS2	Q96PQ0	1159 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	KCNJ15	Q99712	375 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	HDHD5	Q9BXW7	423 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	LAT2	Q9GZY6	243 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	PPA2	Q9H2U2	334 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	TMEM185B	Q9H7F4	350 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	EXOSC3	Q9NQT5	275 aa	Known RBP	5.63	□□□□□ -1.51
CIT-213	ENST00000543324	RABL2A	Q9UBK7	228 aa	Predicted RBP	5.63	□□□□□ -1.51
CIT-213	ENST00000543324	GLS2	Q9UI32	602 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	CLEC4A	Q9UMR7	237 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	SSR3	Q9UNL2	185 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	SNX8	Q9Y5X2	465 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324		U3KQ87	197 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	DSPP	Q9NZW4	1301 aa		5.63	□□□□□ -1.51
CIT-213	ENST00000543324	HEATR1	Q9H583	2144 aa	Known RBP	5.63	□□□□□ -1.51
CIT-213	ENST00000543324	C7orf66	A4D0T2	115 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	FABP12	A6NFH5	140 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	DUXA	A6NLW8	204 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	ZNF716	A6NP11	495 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	ZAR1L	A6NP61	321 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	ZNF814	B7Z6K7	855 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	OVOL3	O00110	214 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	HMGN4	O00479	90 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	FAAH	O00519	579 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	TPST2	O60704	377 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	CYTIP	O60759	359 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	FZD7	O75084	574 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	STX11	O75558	287 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	CCNB2	O95067	398 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	OPN1LW	P04000	364 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	RRAS	P10301	218 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	HPGD	P15428	266 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	ARSB	P15848	533 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	CPE	P16870	476 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	ZP3	P21754	424 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	UQCRC2	P22695	453 aa		5.62	□□□□□ -1.51
CIT-213	ENST00000543324	EDNRA	P25101	427 aa		5.62	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms