RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 FLRT2O43155 660 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 HMGN2P05204 90 aaKnown RBP10.23□□□□□ -0.77
CDH4-201ENST00000543233 PGAM2P15259 253 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 ELAVL4P26378 380 aaKnown RBP10.23□□□□□ -0.77
CDH4-201ENST00000543233 FAUP35544 74 aaKnown RBP10.23□□□□□ -0.77
CDH4-201ENST00000543233 PCBP3P57721 371 aaKnown RBP10.23□□□□□ -0.77
CDH4-201ENST00000543233 PRDX1Q06830 199 aaKnown RBP10.23□□□□□ -0.77
CDH4-201ENST00000543233 ZNF542PQ5EBM4 170 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 IQCHQ86VS3 1027 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 RRNAD1Q96FB5 475 aaKnown RBP10.23□□□□□ -0.77
CDH4-201ENST00000543233 DERL3Q96Q80 235 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 C6orf106Q9H6K1 298 aaPredicted RBP10.23□□□□□ -0.77
CDH4-201ENST00000543233 DNAJC4Q9NNZ3 241 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 DSPPQ9NZW4 1301 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 PEX12O00623 359 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 FGF16O43320 207 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 GSTZ1O43708 216 aaPredicted RBP10.23□□□□□ -0.77
CDH4-201ENST00000543233 ERCC1P07992 297 aaPredicted RBP10.23□□□□□ -0.77
CDH4-201ENST00000543233 HOXC12P31275 282 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 CEACAM8P31997 349 aaPredicted RBP10.23□□□□□ -0.77
CDH4-201ENST00000543233 PMELP40967 661 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 CEBPGP53567 150 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 CD81P60033 236 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 EFNB1P98172 346 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 C1orf94Q6P1W5 598 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 ZNF322Q6U7Q0 402 aaPredicted RBP10.23□□□□□ -0.77
CDH4-201ENST00000543233 S100A7AQ86SG5 101 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 SFTPA2Q8IWL1 248 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 SLC7A13Q8TCU3 470 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 NEURL3Q96EH8 262 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 NKX3-1Q99801 234 aaPredicted RBP10.23□□□□□ -0.77
CDH4-201ENST00000543233 MRI1Q9BV20 369 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 DOCK8Q8NF50 2099 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 A0A1W2PPQ1 181 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 SCGNO76038 276 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 GLCEO94923 617 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 CNOT4O95628 575 aaKnown RBP10.22□□□□□ -0.77
CDH4-201ENST00000543233 CYB5R3P00387 301 aaPredicted RBP10.22□□□□□ -0.77
CDH4-201ENST00000543233 CEACAM5P06731 702 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 IGFALSP35858 605 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 CEACAM6P40199 344 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 PPM1FP49593 454 aaPredicted RBP10.22□□□□□ -0.77
CDH4-201ENST00000543233 BTN3A2P78410 334 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 REEP5Q00765 189 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 TLE4Q04727 773 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 DCAF10Q5QP82 559 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 SMIM15Q7Z3B0 74 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 C5orf24Q7Z6I8 188 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 ZNF761Q86XN6 746 aaPredicted RBP10.22□□□□□ -0.77
CDH4-201ENST00000543233 ACOT4Q8N9L9 421 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 OR10H4Q8NGA5 316 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 OR1N1Q8NGS0 311 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 FAAP24Q9BTP7 215 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 EIF5A2Q9GZV4 153 aaKnown RBP10.22□□□□□ -0.77
CDH4-201ENST00000543233 NKX2-4Q9H2Z4 354 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 FKRPQ9H9S5 495 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 SERINC1Q9NRX5 453 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 PUS1Q9Y606 427 aaKnown RBP eCLIP10.22□□□□□ -0.77
CDH4-201ENST00000543233 COLEC10Q9Y6Z7 277 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 A0A1W2PR48 441 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 GXYLT2A0PJZ3 443 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 MFNGO00587 321 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 HIST1H2BKO60814 126 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 HIST1H2BJP06899 126 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 METTL15P1P0C7V9 234 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 CD79AP11912 226 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 HIST1H2BOP23527 126 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 HIST1H2BBP33778 126 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 MC3RP41968 323 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 HIST1H2BDP58876 126 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 HIST1H2BCP62807 126 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 GAGE1Q13065 139 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 CBFBQ13951 182 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 HNF4GQ14541 408 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 HIST2H2BEQ16778 126 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 PNLIPRP3Q17RR3 467 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 ACSM3Q53FZ2 586 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.22□□□□□ -0.77
CDH4-201ENST00000543233 ZNF770Q6IQ21 691 aaPredicted RBP10.22□□□□□ -0.77
CDH4-201ENST00000543233 RPTNQ6XPR3 784 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 OR5AP2Q8NGF4 316 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 LCN9Q8WX39 176 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 PATE1Q8WXA2 126 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 DCUN1D4Q92564 292 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 HIST1H2BHQ93079 126 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 HIST1H2BNQ99877 126 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 HIST1H2BMQ99879 126 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 TEX101Q9BY14 249 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 UBQLN4Q9NRR5 601 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 TBC1D29Q9UFV1 150 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 FBXO4Q9UKT5 387 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 ICKQ9UPZ9 632 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 EXOGQ9Y2C4 368 aaKnown RBP10.22□□□□□ -0.77
CDH4-201ENST00000543233 NTNG1Q9Y2I2 539 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 CHD3Q12873 2000 aaKnown RBP10.22□□□□□ -0.77
CDH4-201ENST00000543233 A0A0G2JK05 382 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 EEF1E1-BLOC1S5C9J1V9 151 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 ITGB1BP1O14713 200 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 RDH16O75452 317 aa10.22□□□□□ -0.77
CDH4-201ENST00000543233 SCAF4O95104 1147 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms