RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 NGBQ9NPG2 151 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 STRAPQ9Y3F4 350 aaKnown RBP11.98□□□□□ -0.49
TNC-212ENST00000542877 C4orf47A7E2U8 309 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 RBP2P50120 134 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 SLC10A1Q14973 349 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 CATSPERDQ86XM0 798 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 SLAMF6Q96DU3 332 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 GNPNAT1Q96EK6 184 aaPredicted RBP11.98□□□□□ -0.49
TNC-212ENST00000542877 ZNF346Q9UL40 294 aaKnown RBP11.98□□□□□ -0.49
TNC-212ENST00000542877 RPH3ALQ9UNE2 315 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 MAST2Q6P0Q8 1798 aa11.98□□□□□ -0.49
TNC-212ENST00000542877 DDX60Q8IY21 1712 aaKnown RBP11.98□□□□□ -0.49
TNC-212ENST00000542877 OR5H14A6NHG9 310 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 SLC2A1P11166 492 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 BSGP35613 385 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 NKAIN2Q5VXU1 208 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 ZNF705AQ6ZN79 300 aaPredicted RBP11.97□□□□□ -0.49
TNC-212ENST00000542877 SYT13Q7L8C5 426 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 SSX9Q7RTT3 188 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 SLC37A2Q8TED4 501 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 GAB2Q9UQC2 676 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 A0A087WV62 115 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 PXDC1Q5TGL8 231 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 OR10J5Q8NHC4 309 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 ZNF732B4DXR9 585 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 YKT6O15498 198 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 ZNF749O43361 778 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 FGF17O60258 216 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 OR8U8P0C7N1 319 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 ACKR1Q16570 336 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 TAF9Q16594 264 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 PLXDC2Q6UX71 529 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 TFAP2EQ6VUC0 442 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 NXPE3Q969Y0 559 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 MRPL38Q96DV4 380 aaKnown RBP11.97□□□□□ -0.49
TNC-212ENST00000542877 NRSN2Q9GZP1 204 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 G3V3Y1 287 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 SSBP1Q04837 148 aaKnown RBP11.97□□□□□ -0.49
TNC-212ENST00000542877 ZNF680Q8NEM1 530 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 INTS12Q96CB8 462 aaKnown RBP11.97□□□□□ -0.49
TNC-212ENST00000542877 ERVMER34-1Q9H9K5 563 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 ZNF724A8MTY0 619 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 FCMRO60667 390 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 ACKR3P25106 362 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 RRADP55042 308 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 EXOSC2Q13868 293 aaKnown RBP11.97□□□□□ -0.49
TNC-212ENST00000542877 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.97□□□□□ -0.49
TNC-212ENST00000542877 RTN4RL1Q86UN2 441 aaPredicted RBP11.97□□□□□ -0.49
TNC-212ENST00000542877 TCTE3Q8IZS6 198 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 SLC35G3Q8N808 338 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 EMG1Q92979 244 aaKnown RBP11.97□□□□□ -0.49
TNC-212ENST00000542877 LURAP1Q96LR2 239 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 R3HDMLQ9H3Y0 253 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 TBC1D29Q9UFV1 150 aa11.97□□□□□ -0.49
TNC-212ENST00000542877 DEGS1O15121 323 aa11.96□□□□□ -0.49
TNC-212ENST00000542877 PRTGQ2VWP7 1150 aa11.96□□□□□ -0.49
TNC-212ENST00000542877 TMEM182Q6ZP80 229 aaPredicted RBP11.96□□□□□ -0.49
TNC-212ENST00000542877 SLC38A9Q8NBW4 561 aa11.96□□□□□ -0.49
TNC-212ENST00000542877 OR51E1Q8TCB6 317 aa11.96□□□□□ -0.49
TNC-212ENST00000542877 ZNF2Q9BSG1 426 aaPredicted RBP11.96□□□□□ -0.49
TNC-212ENST00000542877 TMEM235A6NFC5 223 aa11.96□□□□□ -0.49
TNC-212ENST00000542877 MAGEB4O15481 346 aaPredicted RBP11.96□□□□□ -0.49
TNC-212ENST00000542877 OR2C1O95371 312 aa11.96□□□□□ -0.49
TNC-212ENST00000542877 PPICP45877 212 aa11.96□□□□□ -0.49
TNC-212ENST00000542877 NPBWR1P48145 328 aa11.96□□□□□ -0.49
TNC-212ENST00000542877 ZNF85Q03923 595 aa11.96□□□□□ -0.49
TNC-212ENST00000542877 SPPL3Q8TCT6 385 aa11.96□□□□□ -0.49
TNC-212ENST00000542877 NIT2Q9NQR4 276 aa11.96□□□□□ -0.49
TNC-212ENST00000542877 OR10A3P58181 314 aa11.96□□□□□ -0.5
TNC-212ENST00000542877 ZNF239Q16600 458 aaKnown RBP11.96□□□□□ -0.5
TNC-212ENST00000542877 THEM4Q5T1C6 240 aa11.96□□□□□ -0.5
TNC-212ENST00000542877 STAC2Q6ZMT1 411 aa11.96□□□□□ -0.5
TNC-212ENST00000542877 OR2AK2Q8NG84 335 aa11.96□□□□□ -0.5
TNC-212ENST00000542877 TMED6Q8WW62 240 aa11.96□□□□□ -0.5
TNC-212ENST00000542877 PLEKHA2Q9HB19 425 aa11.96□□□□□ -0.5
TNC-212ENST00000542877 HRH3Q9Y5N1 445 aa11.96□□□□□ -0.5
TNC-212ENST00000542877 OR4E1P0C645 316 aa11.96□□□□□ -0.5
TNC-212ENST00000542877 RBPJQ06330 500 aa11.96□□□□□ -0.5
TNC-212ENST00000542877 CTF1Q16619 201 aa11.96□□□□□ -0.5
TNC-212ENST00000542877 TBC1D28Q2M2D7 210 aa11.96□□□□□ -0.5
TNC-212ENST00000542877 C20orf24Q9BUV8 137 aa11.96□□□□□ -0.5
TNC-212ENST00000542877 AK3Q9UIJ7 227 aa11.96□□□□□ -0.5
TNC-212ENST00000542877 OSGIN2Q9Y236 505 aa11.96□□□□□ -0.5
TNC-212ENST00000542877 PPP5D1E7EU14 171 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 MGMTP16455 207 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 CD27P26842 260 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 ADPRHP54922 357 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 GPR85P60893 370 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 MRPL58Q14197 206 aaKnown RBP11.95□□□□□ -0.5
TNC-212ENST00000542877 C2orf76Q3KRA6 126 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 FER1L6-AS2Q96M78 137 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 ATF6BQ99941 703 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 RNF32Q9H0A6 362 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 FLVCR1Q9Y5Y0 555 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 URGCP-MRPS24S4R325 110 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 TJP1Q07157 1748 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 CACNA1SQ13698 1873 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 PLCH1Q4KWH8 1693 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 TRAV1-2A0A0B4J238 106 aa11.95□□□□□ -0.5
TNC-212ENST00000542877 UMAD1C9J7I0 102 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms