RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 PHBP35232 272 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 HMGCLP35914 325 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 PLTPP55058 493 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 FBXW4P57775 412 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 ERVK-25P63136 954 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 TLE4Q04727 773 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 CDH17Q12864 832 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 RCAN2Q14206 197 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 CYTH1Q15438 398 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 LTB4RQ15722 352 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 SLC22A6Q4U2R8 563 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 CCNJQ5T5M9 372 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 C6orf183Q5T699 404 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 C9orf66Q5T8R8 295 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 GPR157Q5UAW9 335 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 ERICH5Q6P6B1 374 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 MRPL21Q7Z2W9 205 aaKnown RBP3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 NOTCH2NLQ7Z3S9 236 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 HDDC2Q7Z4H3 204 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 COMTD1Q86VU5 262 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 SPATA24Q86W54 205 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 CLVS1Q8IUQ0 354 aaPredicted RBP3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 APOBEC3FQ8IUX4 373 aaKnown RBP3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 C9orf40Q8IXQ3 194 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 ZNF100Q8IYN0 542 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 SLC22A18ASQ8N1D0 253 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 GATSQ8NAP1 163 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 INO80EQ8NBZ0 244 aaPredicted RBP3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 OR1S2Q8NGQ3 325 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 NPRL2Q8WTW4 380 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 CA5BP1Q8WTZ4 195 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 TFB1MQ8WVM0 346 aaKnown RBP3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 FGF11Q92914 225 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 NAT6Q93015 286 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 DGCR14Q96DF8 476 aaKnown RBP3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 HSFY1Q96LI6 401 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 ZNF597Q96LX8 424 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 OPALINQ96PE5 141 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 MS4A4EQ96PG1 132 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 OR8B4Q96RC9 309 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 SELENOSQ9BQE4 189 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 MRPL45Q9BRJ2 306 aaKnown RBP3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 CHCHD5Q9BSY4 110 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 TMEM59Q9BXS4 323 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 TM6SF2Q9BZW4 377 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 UCK2Q9BZX2 261 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 NMUR2Q9GZQ4 415 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 JPT2Q9H910 190 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 PLGRKTQ9HBL7 147 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 IMPAD1Q9NX62 359 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 GIN1Q9NXP7 522 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 SLC39A1Q9NY26 324 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 EMC3Q9P0I2 261 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 ASIC3Q9UHC3 531 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 KPTNQ9Y664 436 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 CACNA1GO43497 2377 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 EPG5Q9HCE0 2579 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 EYSQ5T1H1 3165 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 IGLV7-46A0A075B6I9 117 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 SMIM28A0A1B0GU29 152 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 GSTTP1A0A1W2PQM5 241 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 GOLGA8IPA6NC78 632 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 EFCAB7A8K855 629 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 A8MXK9 166 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 RSPH10B2B2RC85 870 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 LOC110117498-PIK3R3F6TDL0 507 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 GOLGA8RI6L899 631 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 K7ENP7 123 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 CCL21O00585 134 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 HDAC3O15379 428 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 MBTPS2O43462 519 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 KLRC4O43908 158 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 POP4O95707 220 aaKnown RBP3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 IGLV1-44P01699 117 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 HLA-HP01893 362 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 FGGP02679 453 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 HMGN1P05114 100 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 RSPH10BP0C881 870 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 RBMY1CP0DJD4 496 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 CCL5P13501 91 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 ZNF3P17036 446 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 CCNOP22674 350 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 ANOS1P23352 680 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 FASP25445 335 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 RORAP35398 523 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 GPM6AP51674 278 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 PLK1P53350 603 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 CRISP1P54107 249 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 BIDP55957 195 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 GPX6P59796 221 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 KRTAP10-6P60371 365 aaPredicted RBP3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 ERVPABLB-1P60509 514 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 LMO4P61968 165 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 POLR2GP62487 172 aaKnown RBP eCLIP3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 LCN2P80188 198 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 SMARCB1Q12824 385 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 GPR176Q14439 515 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 IL17AQ16552 155 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 TNFAIP8L3Q5GJ75 292 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 ZNF506Q5JVG8 444 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms