RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 FAM96BQ9Y3D0 163 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 BRWD3Q6RI45 1802 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 ZNF106Q9H2Y7 1883 aaKnown RBP5.22□□□□□ -1.57
XRCC4-206ENST00000542685 COL4A5P29400 1685 aa5.21□□□□□ -1.57
XRCC4-206ENST00000542685 EVPLQ92817 2033 aa5.21□□□□□ -1.57
XRCC4-206ENST00000542685 FXYD6-FXYD2A0A087WZ82 144 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 A0A0A6YYH2 397 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 A0A1W2PPE3 182 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 A6NJ64 397 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 DUXAA6NLW8 204 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 ZNF726A6NNF4 738 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 ZNF724A8MTY0 619 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 C9J4A7 227 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 UBFD1O14562 309 aaKnown RBP5.21□□□□□ -1.58
XRCC4-206ENST00000542685 OR7A17O14581 309 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 RGS14O43566 566 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 CYTIPO60759 359 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 SLCO2B1O94956 709 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 CD8AP01732 235 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 APODP05090 189 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 SCGB1A1P11684 91 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 TPT1P13693 172 aaKnown RBP5.21□□□□□ -1.58
XRCC4-206ENST00000542685 TBPP20226 339 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 SLC2A5P22732 501 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 CD82P27701 267 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 GABRR2P28476 465 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 FAUP35544 74 aaKnown RBP5.21□□□□□ -1.58
XRCC4-206ENST00000542685 RPL3P39023 403 aaKnown RBP5.21□□□□□ -1.58
XRCC4-206ENST00000542685 CAV2P51636 162 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 ZNF140P52738 457 aaPredicted RBP5.21□□□□□ -1.58
XRCC4-206ENST00000542685 PRRX1P54821 245 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 MTPNP58546 118 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 TAS2R50P59544 299 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 STXBP1P61764 594 aaKnown RBP5.21□□□□□ -1.58
XRCC4-206ENST00000542685 RANP62826 216 aaKnown RBP5.21□□□□□ -1.58
XRCC4-206ENST00000542685 CDK6Q00534 326 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 PMPCAQ10713 525 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 SNTB2Q13425 540 aaKnown RBP5.21□□□□□ -1.58
XRCC4-206ENST00000542685 SHHQ15465 462 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 SMAD1Q15797 465 aaKnown RBP5.21□□□□□ -1.58
XRCC4-206ENST00000542685 ATP6V1FQ16864 119 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 SCGB2B2Q4G0G5 96 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 RAB41Q5JT25 222 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 C22orf42Q6IC83 251 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 JMJD6Q6NYC1 403 aaPredicted RBP5.21□□□□□ -1.58
XRCC4-206ENST00000542685 FBXO46Q6PJ61 603 aaPredicted RBP5.21□□□□□ -1.58
XRCC4-206ENST00000542685 TSSK4Q6SA08 328 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 GALNTL5Q7Z4T8 443 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 CTU1Q7Z7A3 348 aaKnown RBP5.21□□□□□ -1.58
XRCC4-206ENST00000542685 CACUL1Q86Y37 369 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 PTOV1Q86YD1 416 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 SLC30A8Q8IWU4 369 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 C9orf40Q8IXQ3 194 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 DEFB106AQ8N104 65 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 HIST3H2BBQ8N257 126 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 IQCF1Q8N6M8 205 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 EXD3Q8N9H8 876 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 SLC30A7Q8NEW0 376 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 OR7G2Q8NG99 324 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 OR10D4PQ8NGN7 298 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 OR1S2Q8NGQ3 325 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 ORAOV1Q8WV07 137 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 SMIM4Q8WVI0 70 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 NUDCD2Q8WVJ2 157 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 METTL21AQ8WXB1 218 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 OR8D1Q8WZ84 308 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 HSD17B8Q92506 261 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 MOCOSQ96EN8 888 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 ATXN7L3BQ96GX2 97 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 SLC41A3Q96GZ6 507 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 ITCHQ96J02 903 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 ATOH8Q96SQ7 321 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 CNN2Q99439 309 aaKnown RBP5.21□□□□□ -1.58
XRCC4-206ENST00000542685 PHB2Q99623 299 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 URM1Q9BTM9 101 aaKnown RBP5.21□□□□□ -1.58
XRCC4-206ENST00000542685 FICDQ9BVA6 458 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 SNHG12Q9BXW3 62 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 DUSP16Q9BY84 665 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 MRPL13Q9BYD1 178 aaKnown RBP5.21□□□□□ -1.58
XRCC4-206ENST00000542685 TMEM39BQ9GZU3 492 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 WWTR1Q9GZV5 400 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 FXYD6Q9H0Q3 95 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 FBXO44Q9H4M3 255 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 CWH43Q9H720 699 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 TMEM27Q9HBJ8 222 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 FGF20Q9NP95 211 aaPredicted RBP5.21□□□□□ -1.58
XRCC4-206ENST00000542685 CUTCQ9NTM9 273 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 HAO2Q9NYQ3 351 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 ABRACLQ9P1F3 81 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 PRODH2Q9UF12 536 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 FBXW11Q9UKB1 542 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 CAMK2AQ9UQM7 478 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 FIS1Q9Y3D6 152 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 NEUROG3Q9Y4Z2 214 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 NME7Q9Y5B8 376 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 WIF1Q9Y5W5 379 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 PLXNA3P51805 1871 aa5.21□□□□□ -1.58
XRCC4-206ENST00000542685 DOCK4Q8N1I0 1966 aa5.2□□□□□ -1.58
XRCC4-206ENST00000542685 A0A087WWC5 75 aa5.2□□□□□ -1.58
XRCC4-206ENST00000542685 KIR2DL5BA0A0G2JN68 375 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms