RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 NHSL1Q5SYE7 1610 aa4.72□□□□□ -1.65
SNHG1-218ENST00000541615 SLIT2O94813 1529 aa4.72□□□□□ -1.65
SNHG1-218ENST00000541615 A0A0B4J2A0 478 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 A0A0G2JN53 185 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-218ENST00000541615 A0A1B0GW15 77 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 TMEM213A2RRL7 107 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 TMEM235A6NFC5 223 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 TVP23AA6NH52 213 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 G3V4G9 280 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 PEX12O00623 359 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 SCDO00767 359 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 AQP7O14520 342 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 EIF1AYO14602 144 aaKnown RBP4.71□□□□□ -1.66
SNHG1-218ENST00000541615 RBFOX2O43251 390 aaKnown RBP eCLIP4.71□□□□□ -1.66
SNHG1-218ENST00000541615 LAMTOR5O43504 91 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 XRCC3O43542 346 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 PDE6DO43924 150 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 HBP1O60381 514 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 CLDN11O75508 207 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 LRATO95237 230 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 TSPAN13O95857 204 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 MT-ATP6P00846 226 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 JCHAINP01591 159 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 C4BPAP04003 597 aaKnown RBP4.71□□□□□ -1.66
SNHG1-218ENST00000541615 GBAP04062 536 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 TRGC1P0CF51 173 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 EBLN1P0CF75 366 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 SMIM10L1P0DMW3 83 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 SELEP16581 610 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 GSTM3P21266 225 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 GPD1P21695 349 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 DRD1P21728 446 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 ACHEP22303 614 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 FCARP24071 287 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 EDNRBP24530 442 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 OTX2P32243 289 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 DLSTP36957 453 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 SOX3P41225 446 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 EIF1AXP47813 144 aaKnown RBP4.71□□□□□ -1.66
SNHG1-218ENST00000541615 SLC6A9P48067 706 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 CXCR3P49682 368 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 THBS3P49746 956 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 UCP2P55851 309 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 FOXL2P58012 376 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 ST8SIA6P61647 398 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 DYNLT1P63172 113 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 PRR5P85299 388 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 FAM3AP98173 230 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 SSBP1Q04837 148 aaKnown RBP4.71□□□□□ -1.66
SNHG1-218ENST00000541615 RBBP4Q09028 425 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 RAB40BQ12829 278 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 FZD5Q13467 585 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 CAPSQ13938 189 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 ZBTB6Q15916 424 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 POU2AF1Q16633 256 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 C5orf47Q569G3 176 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.71□□□□□ -1.66
SNHG1-218ENST00000541615 ZNF770Q6IQ21 691 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-218ENST00000541615 ADNP2Q6IQ32 1131 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 ANKRD16Q6P6B7 361 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 C6orf15Q6UXA7 325 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-218ENST00000541615 FRRS1Q6ZNA5 592 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 COX15Q7KZN9 410 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 CMC1Q7Z7K0 106 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 S100A7AQ86SG5 101 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 YRDCQ86U90 279 aaKnown RBP4.71□□□□□ -1.66
SNHG1-218ENST00000541615 CALHM3Q86XJ0 350 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 PHYKPLQ8IUZ5 450 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 GPR135Q8IZ08 494 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 WDTC1Q8N5D0 677 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 GATSQ8NAP1 163 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 OR11G2Q8NGC1 345 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 OR4D9Q8NGE8 314 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 OR4B1Q8NGF8 309 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 OR8J1Q8NGP2 316 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 LYPD6BQ8NI32 183 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 SH3RF2Q8TEC5 729 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 TWIST2Q8WVJ9 160 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 FCAMRQ8WWV6 532 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 CACNG8Q8WXS5 425 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 SMPDL3BQ92485 455 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 MS4A6EQ96DS6 147 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 MRAP2Q96G30 205 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 SMIM10Q96HG1 83 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 GJD4Q96KN9 370 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-218ENST00000541615 C12orf42Q96LP6 360 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 FER1L6-AS2Q96M78 137 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 GPR78Q96P69 363 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 IL17FQ96PD4 163 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 RHNO1Q9BSD3 238 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 FNDC11Q9BVV2 318 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 HINT2Q9BX68 163 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 SLC46A2Q9BY10 475 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 SLC17A9Q9BYT1 436 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 CTDSP1Q9GZU7 261 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 MTHFD2LQ9H903 347 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-218ENST00000541615 TBC1D17Q9HA65 648 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 SGK2Q9HBY8 427 aa4.71□□□□□ -1.66
SNHG1-218ENST00000541615 FGF20Q9NP95 211 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms