RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 TMEM211Q6ICI0 200 aa24.48■■□□□ 1.51
CCM2-218ENST00000541586 CD200R1LQ6Q8B3 271 aa24.48■■□□□ 1.51
CCM2-218ENST00000541586 YIPF7Q8N8F6 280 aa24.48■■□□□ 1.51
CCM2-218ENST00000541586 SLCO1C1Q9NYB5 712 aa24.48■■□□□ 1.51
CCM2-218ENST00000541586 A0A1B0GUH1 482 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 OGG1O15527 345 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 FCGR2AP12318 317 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 FABP5Q01469 135 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 CCDC58Q4VC31 144 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 LINC00346Q8IVM7 164 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 RNF166Q96A37 237 aaPredicted RBP24.47■■□□□ 1.51
CCM2-218ENST00000541586 OR8B4Q96RC9 309 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 CDADC1Q9BWV3 514 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 ULBP2Q9BZM5 246 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 DCSTAMPQ9H295 470 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 RNF122Q9H9V4 155 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 MBD3L4A6NDZ8 208 aaPredicted RBP24.47■■□□□ 1.51
CCM2-218ENST00000541586 MBD3L3A6NE82 208 aaPredicted RBP24.47■■□□□ 1.51
CCM2-218ENST00000541586 MBD3L5A6NJ08 208 aaPredicted RBP24.47■■□□□ 1.51
CCM2-218ENST00000541586 DHHO43323 396 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 UPK3AO75631 287 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 UGT2B10P36537 528 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 SLC3A1Q07837 685 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 CDK5R1Q15078 307 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 LIPNQ5VXI9 398 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 RPL22L1Q6P5R6 122 aaKnown RBP24.47■■□□□ 1.51
CCM2-218ENST00000541586 USP43Q70EL4 1123 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 DCXRQ7Z4W1 244 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 MBD3L2Q8NHZ7 208 aaPredicted RBP24.47■■□□□ 1.51
CCM2-218ENST00000541586 HTRA1Q92743 480 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 DMRTA2Q96SC8 542 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 EMC7Q9NPA0 242 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 TXNL4BQ9NX01 149 aaKnown RBP24.47■■□□□ 1.51
CCM2-218ENST00000541586 EMC3Q9P0I2 261 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 CYB5R1Q9UHQ9 305 aa24.47■■□□□ 1.51
CCM2-218ENST00000541586 NOSIPQ9Y314 301 aaKnown RBP24.47■■□□□ 1.51
CCM2-218ENST00000541586 TMCC2O75069 709 aa24.46■■□□□ 1.51
CCM2-218ENST00000541586 PLA2G2AP14555 144 aa24.46■■□□□ 1.51
CCM2-218ENST00000541586 EDNRAP25101 427 aa24.46■■□□□ 1.51
CCM2-218ENST00000541586 TIMP3P35625 211 aa24.46■■□□□ 1.51
CCM2-218ENST00000541586 ROM1Q03395 351 aa24.46■■□□□ 1.51
CCM2-218ENST00000541586 RNPS1Q15287 305 aaKnown RBP24.46■■□□□ 1.51
CCM2-218ENST00000541586 KCNMB1Q16558 191 aa24.46■■□□□ 1.51
CCM2-218ENST00000541586 CORO6Q6QEF8 472 aa24.46■■□□□ 1.51
CCM2-218ENST00000541586 LRRN1Q6UXK5 716 aa24.46■■□□□ 1.51
CCM2-218ENST00000541586 TUSC5Q8IXB3 177 aa24.46■■□□□ 1.51
CCM2-218ENST00000541586 OR52N5Q8NH56 324 aa24.46■■□□□ 1.51
CCM2-218ENST00000541586 DYNC2LI1Q8TCX1 351 aa24.46■■□□□ 1.51
CCM2-218ENST00000541586 ST7LQ8TDW4 575 aa24.46■■□□□ 1.51
CCM2-218ENST00000541586 PGLYRP3Q96LB9 341 aa24.46■■□□□ 1.51
CCM2-218ENST00000541586 DCLRE1CQ96SD1 692 aaKnown RBP24.46■■□□□ 1.51
CCM2-218ENST00000541586 BCO1Q9HAY6 547 aa24.46■■□□□ 1.51
CCM2-218ENST00000541586 POLE4Q9NR33 117 aa24.46■■□□□ 1.51
CCM2-218ENST00000541586 RPP14O95059 124 aaKnown RBP24.45■■□□□ 1.5
CCM2-218ENST00000541586 WNT11O96014 354 aa24.45■■□□□ 1.5
CCM2-218ENST00000541586 HLA-DPB1P04440 258 aa24.45■■□□□ 1.5
CCM2-218ENST00000541586 CD53P19397 219 aa24.45■■□□□ 1.5
CCM2-218ENST00000541586 TGM4P49221 684 aa24.45■■□□□ 1.5
CCM2-218ENST00000541586 C4orf17Q53FE4 359 aa24.45■■□□□ 1.5
CCM2-218ENST00000541586 KCTD18Q6PI47 426 aaPredicted RBP24.45■■□□□ 1.5
CCM2-218ENST00000541586 ZNF679Q8IYX0 411 aa24.45■■□□□ 1.5
CCM2-218ENST00000541586 KBTBD8Q8NFY9 601 aa24.45■■□□□ 1.5
CCM2-218ENST00000541586 RND1Q92730 232 aa24.45■■□□□ 1.5
CCM2-218ENST00000541586 SMIM19Q96E16 107 aa24.45■■□□□ 1.5
CCM2-218ENST00000541586 RBM24Q9BX46 236 aaKnown RBP24.45■■□□□ 1.5
CCM2-218ENST00000541586 HDHD5Q9BXW7 423 aa24.45■■□□□ 1.5
CCM2-218ENST00000541586 TRDV1A0A1B0GX56 115 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 FOXF2Q12947 444 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 LSAMPQ13449 338 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 C22orf42Q6IC83 251 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 FOXL2NBQ6ZUU3 175 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 SPATC1Q76KD6 591 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 CNEP1R1Q8N9A8 125 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 NAXEQ8NCW5 288 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 ZNF837Q96EG3 531 aaPredicted RBP24.44■■□□□ 1.5
CCM2-218ENST00000541586 MROQ9BYG7 248 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 ELOVL3Q9HB03 270 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 MED12LQ86YW9 2145 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 TRBV2A0A0J9YWF9 115 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 ZNF724A8MTY0 619 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 MRPL33O75394 65 aaKnown RBP24.44■■□□□ 1.5
CCM2-218ENST00000541586 TMIGD3P0DMS9 266 aaPredicted RBP24.44■■□□□ 1.5
CCM2-218ENST00000541586 SERPINB10P48595 397 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 OR2A2Q6IF42 318 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 ZC3HAV1Q7Z2W4 902 aaKnown RBP24.44■■□□□ 1.5
CCM2-218ENST00000541586 KRT77Q7Z794 578 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 GPR137CQ8N3F9 429 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 HSD17B8Q92506 261 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 GHSRQ92847 366 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 LHFPL6Q9Y693 200 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 ARHGAP21Q5T5U3 1957 aa24.44■■□□□ 1.5
CCM2-218ENST00000541586 FGF9P31371 208 aaPredicted RBP24.43■■□□□ 1.5
CCM2-218ENST00000541586 GDI2P50395 445 aaKnown RBP24.43■■□□□ 1.5
CCM2-218ENST00000541586 NANOS3P60323 173 aaKnown RBP24.43■■□□□ 1.5
CCM2-218ENST00000541586 TUBA1BP68363 451 aa24.43■■□□□ 1.5
CCM2-218ENST00000541586 MRPL28Q13084 256 aaKnown RBP24.43■■□□□ 1.5
CCM2-218ENST00000541586 INSL4Q14641 139 aa24.43■■□□□ 1.5
CCM2-218ENST00000541586 SGCAQ16586 387 aa24.43■■□□□ 1.5
CCM2-218ENST00000541586 TUBA1AQ71U36 451 aa24.43■■□□□ 1.5
CCM2-218ENST00000541586 RPS4Y2Q8TD47 263 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms