RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 CDADC1Q9BWV3 514 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 MROQ9BYG7 248 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 LINC00470Q9BZP3 86 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 SEC61A2Q9H9S3 476 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 PLGRKTQ9HBL7 147 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 PALMDQ9NP74 551 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 EXOSC4Q9NPD3 245 aaKnown RBP12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 CYB5R1Q9UHQ9 305 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 IKZF2Q9UKS7 526 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 GRIP1Q9Y3R0 1128 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 OR6C65A6NJZ3 312 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 SLC22A20A6NK97 555 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 PSMD9O00233 223 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 LRRTM2O43300 516 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 MRPL33O75394 65 aaKnown RBP12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 YES1P07947 543 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 MSR1P21757 451 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 CDAP32320 146 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 TGFBR1P36897 503 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 GUCA1AP43080 201 aaPredicted RBP12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 FABP5Q01469 135 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 STK11Q15831 433 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 ZNF829Q3KNS6 432 aaPredicted RBP12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 LIPNQ5VXI9 398 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 DEGS2Q6QHC5 323 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 ARL9Q6T311 187 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 RPTNQ6XPR3 784 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 DCXRQ7Z4W1 244 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 TUSC5Q8IXB3 177 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 GPR137CQ8N3F9 429 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 TBC1D15Q8TC07 691 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 CPT1CQ8TCG5 803 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 TMEM203Q969S6 136 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 RNF166Q96A37 237 aaPredicted RBP12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 NABP1Q96AH0 204 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 TRMT61AQ96FX7 289 aaKnown RBP12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 TM9SF2Q99805 663 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 RBM24Q9BX46 236 aaKnown RBP12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 DCSTAMPQ9H295 470 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 MMP27Q9H306 513 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 NELFAQ9H3P2 528 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 C1orf198Q9H425 327 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 RNF167Q9H6Y7 350 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 TXNL4BQ9NX01 149 aaKnown RBP12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 SLCO1C1Q9NYB5 712 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 CLCF1Q9UBD9 225 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 ARHGAP21Q5T5U3 1957 aa12.57□□□□□ -0.4
CYB561A3-216ENST00000540755 A0A1B0GTH9 108 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 ZNF254O75437 659 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 EDNRAP25101 427 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 SOX6P35712 828 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 MRPS34P82930 218 aaKnown RBP12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 FDX2Q6P4F2 183 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 PLXDC2Q6UX71 529 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 KRT77Q7Z794 578 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 LINC00346Q8IVM7 164 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 MS4A15Q8N5U1 240 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 RNF133Q8WVZ7 376 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 GPR137Q96N19 417 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 TMED9Q9BVK6 235 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 SLCO5A1Q9H2Y9 848 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 ELOVL3Q9HB03 270 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 EMC7Q9NPA0 242 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 GLRX2Q9NS18 164 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 CCDC59Q9P031 241 aaKnown RBP12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 GSTK1Q9Y2Q3 226 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 POLR1DQ9Y2S0 133 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 LHFPL6Q9Y693 200 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 TEX15Q9BXT5 2789 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 SHANK1Q9Y566 2161 aa12.56□□□□□ -0.4
CYB561A3-216ENST00000540755 NOTCH2Q04721 2471 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 TRBV2A0A0J9YWF9 115 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 GABRPO00591 440 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 GPRIN2O60269 458 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 RGS9O75916 674 aaPredicted RBP12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 WISP2O76076 250 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 TGM6O95932 706 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 NPR2P20594 1047 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 PSMB10P40306 273 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 GDI2P50395 445 aaKnown RBP12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 RIDAP52758 137 aaKnown RBP12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 SLC3A1Q07837 685 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 ALKBH1Q13686 389 aaKnown RBP12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 LRRN1Q6UXK5 716 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 RHOUQ7L0Q8 258 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 OR2AJ1Q8NGZ0 328 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 BORCS5Q969J3 196 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 KCNN2Q9H2S1 579 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 CALHM2Q9HA72 323 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 CRLF2Q9HC73 371 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 GPR35Q9HC97 309 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 HMG20AQ9NP66 347 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 GDF2Q9UK05 429 aaPredicted RBP12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 ICE1Q9Y2F5 2266 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 MED12LQ86YW9 2145 aa12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 NCOA6Q14686 2063 aaPredicted RBP12.55□□□□□ -0.4
CYB561A3-216ENST00000540755 HIVEP3Q5T1R4 2406 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 AHRRA9YTQ3 701 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 RPL36A-HNRNPH2H7BZ11 118 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 SC5DO75845 299 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms