RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 SLC25A15Q9Y619 301 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 RTTNQ86VV8 2226 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 A0A1W2PPL8 197 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 IRGMA1A4Y4 181 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 A1L4Q6 167 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 EEF1E1-BLOC1S5C9J1V9 151 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 PRSS44E7EML9 344 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 EEF1E1O43324 174 aaKnown RBP9.2□□□□□ -0.94
VPS33A-204ENST00000540669 SRSF10O75494 262 aaKnown RBP9.2□□□□□ -0.94
VPS33A-204ENST00000540669 SMNDC1O75940 238 aaKnown RBP eCLIP9.2□□□□□ -0.94
VPS33A-204ENST00000540669 LYZL6O75951 148 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 OR2T7P0C7T2 308 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 SMIM18P0DKX4 95 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 DCKP27707 260 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 OPRL1P41146 370 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 NAA10P41227 235 aaPredicted RBP9.2□□□□□ -0.94
VPS33A-204ENST00000540669 CHN2P52757 468 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 ACTC1P68032 377 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 ACTA1P68133 377 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 TGFBR3Q03167 851 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 C3orf36Q3SXR2 165 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 CDONQ4KMG0 1287 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 HIKESHIQ53FT3 197 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 TIMM23BQ5SRD1 257 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 OTPQ5XKR4 325 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 C22orf34Q6ZV56 151 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 SSX6Q7RTT6 188 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 PRSS48Q7RTY5 328 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 DPY19L4Q7Z388 723 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 LUZP2Q86TE4 346 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 P2RY8Q86VZ1 359 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 ZNF786Q8N393 782 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 OR51G2Q8NGK0 314 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 OR2T27Q8NH04 317 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 IPCEF1Q8WWN9 437 aaPredicted RBP9.2□□□□□ -0.94
VPS33A-204ENST00000540669 RNASE6Q93091 150 aaKnown RBP9.2□□□□□ -0.94
VPS33A-204ENST00000540669 ABHD6Q9BV23 337 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 RBM24Q9BX46 236 aaKnown RBP9.2□□□□□ -0.94
VPS33A-204ENST00000540669 WNT5BQ9H1J7 359 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 CCNB1IP1Q9NPC3 277 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 ASH2LQ9UBL3 628 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 PLEKHB1Q9UF11 243 aaPredicted RBP9.2□□□□□ -0.94
VPS33A-204ENST00000540669 BLOC1S6Q9UL45 172 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 CADP27708 2225 aa9.2□□□□□ -0.94
VPS33A-204ENST00000540669 BAHCC1Q9P281 2608 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 CENPEQ02224 2701 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 DOPEY2Q9Y3R5 2298 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 TMEM129A0AVI4 362 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 C12orf71A8MTZ7 269 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 SYNGR3O43761 229 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 FAM20BO75063 409 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 RAD51DO75771 328 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 APOL3O95236 402 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 TNFAIP8O95379 198 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 CLDN14O95500 239 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 THBDP07204 575 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 MRPL3P09001 348 aaKnown RBP9.19□□□□□ -0.94
VPS33A-204ENST00000540669 COX5BP10606 129 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 ZNF14P17017 642 aaPredicted RBP9.19□□□□□ -0.94
VPS33A-204ENST00000540669 ZNF32P17041 273 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 RPS27P42677 84 aaKnown RBP9.19□□□□□ -0.94
VPS33A-204ENST00000540669 ADAM8P78325 824 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 FAM27E3Q08E93 113 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 ST3GAL4Q11206 333 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 TBCEQ15813 527 aaPredicted RBP9.19□□□□□ -0.94
VPS33A-204ENST00000540669 RSPO1Q2MKA7 263 aaPredicted RBP9.19□□□□□ -0.94
VPS33A-204ENST00000540669 KLHL22Q53GT1 634 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 CCDC92Q53HC0 331 aaPredicted RBP9.19□□□□□ -0.94
VPS33A-204ENST00000540669 DEGS2Q6QHC5 323 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 AHSA2Q719I0 299 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 VASH1Q7L8A9 365 aaPredicted RBP9.19□□□□□ -0.94
VPS33A-204ENST00000540669 SHFQ7M4L6 423 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 BHLHA15Q7RTS1 189 aaPredicted RBP9.19□□□□□ -0.94
VPS33A-204ENST00000540669 SSX8Q7RTT4 187 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 MYPOPQ86VE0 399 aaPredicted RBP9.19□□□□□ -0.94
VPS33A-204ENST00000540669 ERI1Q8IV48 349 aaKnown RBP9.19□□□□□ -0.94
VPS33A-204ENST00000540669 SLC35F2Q8IXU6 374 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 SYS1Q8N2H4 156 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 UBE2J2Q8N2K1 259 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 ACBD7Q8N6N7 88 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 BPIFB6Q8NFQ5 453 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 STEAP2Q8NFT2 490 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 OR52N5Q8NH56 324 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 OR8B4Q96RC9 309 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 SH3GL3Q99963 347 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 COPS4Q9BT78 406 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 HDHD5Q9BXW7 423 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 OR2H1Q9GZK4 316 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 HDHD2Q9H0R4 259 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 ERVK13-1Q9NX77 482 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 GDF2Q9UK05 429 aaPredicted RBP9.19□□□□□ -0.94
VPS33A-204ENST00000540669 AMDHD2Q9Y303 409 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 TPRKBQ9Y3C4 175 aa9.19□□□□□ -0.94
VPS33A-204ENST00000540669 KLF2Q9Y5W3 355 aaPredicted RBP9.19□□□□□ -0.94
VPS33A-204ENST00000540669 A0A1W2PQL4 384 aaPredicted RBP9.18□□□□□ -0.94
VPS33A-204ENST00000540669 ZNF593O00488 134 aaPredicted RBP9.18□□□□□ -0.94
VPS33A-204ENST00000540669 KRT33AO76009 404 aa9.18□□□□□ -0.94
VPS33A-204ENST00000540669 UBL3O95164 117 aa9.18□□□□□ -0.94
VPS33A-204ENST00000540669 RAB36O95755 333 aa9.18□□□□□ -0.94
VPS33A-204ENST00000540669 FADS2O95864 444 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms