RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 CASC10Q5T4H9 136 aa12.69□□□□□ -0.38
PUDP-206ENST00000540122 ZNF572Q7Z3I7 529 aaPredicted RBP12.69□□□□□ -0.38
PUDP-206ENST00000540122 COMTD1Q86VU5 262 aa12.69□□□□□ -0.38
PUDP-206ENST00000540122 CALHM3Q86XJ0 350 aa12.69□□□□□ -0.38
PUDP-206ENST00000540122 C1orf87Q8N0U7 546 aa12.69□□□□□ -0.38
PUDP-206ENST00000540122 C19orf18Q8NEA5 215 aa12.69□□□□□ -0.38
PUDP-206ENST00000540122 NOXO1Q8NFA2 376 aa12.69□□□□□ -0.38
PUDP-206ENST00000540122 OR2T6Q8NHC8 308 aa12.69□□□□□ -0.38
PUDP-206ENST00000540122 CMBLQ96DG6 245 aa12.69□□□□□ -0.38
PUDP-206ENST00000540122 OR2H1Q9GZK4 316 aa12.69□□□□□ -0.38
PUDP-206ENST00000540122 CENPHQ9H3R5 247 aa12.69□□□□□ -0.38
PUDP-206ENST00000540122 UGT2A1Q9Y4X1 527 aa12.69□□□□□ -0.38
PUDP-206ENST00000540122 LCE6AA0A183 80 aa12.68□□□□□ -0.38
PUDP-206ENST00000540122 E9PQ18 207 aa12.68□□□□□ -0.38
PUDP-206ENST00000540122 COPEO14579 308 aa12.68□□□□□ -0.38
PUDP-206ENST00000540122 RIPK2O43353 540 aa12.68□□□□□ -0.38
PUDP-206ENST00000540122 RNF13O43567 381 aa12.68□□□□□ -0.38
PUDP-206ENST00000540122 ABHD16AO95870 558 aa12.68□□□□□ -0.38
PUDP-206ENST00000540122 ALDH3A1P30838 453 aa12.68□□□□□ -0.38
PUDP-206ENST00000540122 PMELP40967 661 aa12.68□□□□□ -0.38
PUDP-206ENST00000540122 CLNS1AP54105 237 aaKnown RBP12.68□□□□□ -0.38
PUDP-206ENST00000540122 DSTNP60981 165 aa12.68□□□□□ -0.38
PUDP-206ENST00000540122 C10orf128Q5T292 105 aa12.68□□□□□ -0.38
PUDP-206ENST00000540122 ARL9Q6T311 187 aa12.68□□□□□ -0.38
PUDP-206ENST00000540122 SEPHS2Q99611 448 aa12.68□□□□□ -0.38
PUDP-206ENST00000540122 MRPL13Q9BYD1 178 aaKnown RBP12.68□□□□□ -0.38
PUDP-206ENST00000540122 MMADHCQ9H3L0 296 aaPredicted RBP12.68□□□□□ -0.38
PUDP-206ENST00000540122 CNTD2Q9H8S5 307 aa12.68□□□□□ -0.38
PUDP-206ENST00000540122 AKTIPQ9H8T0 292 aa12.68□□□□□ -0.38
PUDP-206ENST00000540122 SELENONQ9NZV5 590 aa12.68□□□□□ -0.38
PUDP-206ENST00000540122 TMCC3Q9ULS5 477 aa12.68□□□□□ -0.38
PUDP-206ENST00000540122 A0A0B4J2E0 115 aa12.67□□□□□ -0.38
PUDP-206ENST00000540122 A0A1B0GX12 115 aa12.67□□□□□ -0.38
PUDP-206ENST00000540122 SLC2A10O95528 541 aa12.67□□□□□ -0.38
PUDP-206ENST00000540122 F13BP05160 661 aa12.67□□□□□ -0.38
PUDP-206ENST00000540122 NHLRC4P0CG21 123 aaPredicted RBP12.67□□□□□ -0.38
PUDP-206ENST00000540122 SRP9P49458 86 aaKnown RBP12.67□□□□□ -0.38
PUDP-206ENST00000540122 ZNF133P52736 654 aaPredicted RBP12.67□□□□□ -0.38
PUDP-206ENST00000540122 VMO1Q7Z5L0 202 aa12.67□□□□□ -0.38
PUDP-206ENST00000540122 NUDCD3Q8IVD9 361 aa12.67□□□□□ -0.38
PUDP-206ENST00000540122 OR5AS1Q8N127 324 aa12.67□□□□□ -0.38
PUDP-206ENST00000540122 HAVCR1Q96D42 359 aa12.67□□□□□ -0.38
PUDP-206ENST00000540122 PPP1R36Q96LQ0 422 aa12.67□□□□□ -0.38
PUDP-206ENST00000540122 CITED2Q99967 270 aaPredicted RBP12.67□□□□□ -0.38
PUDP-206ENST00000540122 TMEM43Q9BTV4 400 aa12.67□□□□□ -0.38
PUDP-206ENST00000540122 SMURF1Q9HCE7 757 aa12.67□□□□□ -0.38
PUDP-206ENST00000540122 ERVK-18Q9QC07 812 aa12.67□□□□□ -0.38
PUDP-206ENST00000540122 TUBG1P23258 451 aa12.66□□□□□ -0.38
PUDP-206ENST00000540122 SGCAQ16586 387 aa12.66□□□□□ -0.38
PUDP-206ENST00000540122 IGFN1Q86VF2 1251 aa12.66□□□□□ -0.38
PUDP-206ENST00000540122 ALDH16A1Q8IZ83 802 aa12.66□□□□□ -0.38
PUDP-206ENST00000540122 PAPD5Q8NDF8 572 aaKnown RBP12.66□□□□□ -0.38
PUDP-206ENST00000540122 NPRL2Q8WTW4 380 aa12.66□□□□□ -0.38
PUDP-206ENST00000540122 CLPTM1LQ96KA5 538 aa12.66□□□□□ -0.38
PUDP-206ENST00000540122 RANBP3Q9H6Z4 567 aaPredicted RBP12.66□□□□□ -0.38
PUDP-206ENST00000540122 TUBG2Q9NRH3 451 aa12.66□□□□□ -0.38
PUDP-206ENST00000540122 TBCCD1Q9NVR7 557 aa12.66□□□□□ -0.38
PUDP-206ENST00000540122 HUWE1Q7Z6Z7 4374 aaKnown RBP12.65□□□□□ -0.38
PUDP-206ENST00000540122 PRKAR1BP31321 381 aa12.65□□□□□ -0.38
PUDP-206ENST00000540122 RPL4P36578 427 aaKnown RBP12.65□□□□□ -0.38
PUDP-206ENST00000540122 CDH12P55289 794 aa12.65□□□□□ -0.38
PUDP-206ENST00000540122 NCALDP61601 193 aa12.65□□□□□ -0.38
PUDP-206ENST00000540122 HOXA4Q00056 320 aaPredicted RBP12.65□□□□□ -0.38
PUDP-206ENST00000540122 GUCY1A3Q02108 690 aa12.65□□□□□ -0.38
PUDP-206ENST00000540122 EGFEM1PQ0D2K5 195 aa12.65□□□□□ -0.38
PUDP-206ENST00000540122 OR1Q1Q15612 314 aa12.65□□□□□ -0.38
PUDP-206ENST00000540122 ZNF74Q16587 644 aa12.65□□□□□ -0.38
PUDP-206ENST00000540122 CDONQ4KMG0 1287 aa12.65□□□□□ -0.38
PUDP-206ENST00000540122 FAM27BQ5VT28 67 aa12.65□□□□□ -0.38
PUDP-206ENST00000540122 TRMT10CQ7L0Y3 403 aaKnown RBP12.65□□□□□ -0.38
PUDP-206ENST00000540122 TMEM27Q9HBJ8 222 aa12.65□□□□□ -0.38
PUDP-206ENST00000540122 BCL2L10Q9HD36 194 aa12.65□□□□□ -0.38
PUDP-206ENST00000540122 STARD10Q9Y365 291 aa12.65□□□□□ -0.38
PUDP-206ENST00000540122 PCLOQ9Y6V0 5065 aa12.65□□□□□ -0.38
PUDP-206ENST00000540122 IGKV1D-43A0A0B4J1Z2 117 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 A0A1B0GVI7 797 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 TMEM247A6NEH6 219 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 CENPBD1B2RD01 187 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 F5H5P2 479 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 H3BUX3 64 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 NPFFO15130 113 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 OR10H3O60404 316 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 TRMUO75648 421 aaKnown RBP12.64□□□□□ -0.39
PUDP-206ENST00000540122 CH25HO95992 272 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 PAHP00439 452 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 IRF2P14316 349 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 KRT4P19013 534 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 NME5P56597 212 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 PRB3Q04118 309 aaPredicted RBP12.64□□□□□ -0.39
PUDP-206ENST00000540122 DMRTC1Q5HYR2 192 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 C4orf33Q8N1A6 199 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 OR13G1Q8NGZ3 307 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 MUC7Q8TAX7 377 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 NSMAFQ92636 917 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 ZIM3Q96PE6 472 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 OR52E6Q96RD3 313 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 MEAF6Q9HAF1 191 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 NDRG4Q9ULP0 352 aaKnown RBP12.64□□□□□ -0.39
PUDP-206ENST00000540122 MAB21L2Q9Y586 359 aa12.64□□□□□ -0.39
PUDP-206ENST00000540122 TIMM10BQ9Y5J6 103 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms