RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 HMGN1P05114 100 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 PRR23D2P0DMB1 279 aaPredicted RBP6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 PSKH1P11801 424 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 ZNF35P13682 527 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 PAICSP22234 425 aaKnown RBP6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 SLC2A5P22732 501 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 APEX1P27695 318 aaKnown RBP6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 PEX2P28328 305 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 PYCR1P32322 319 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 GGT2P36268 569 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 POLR2IP36954 125 aaKnown RBP6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 CENPAP49450 140 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 PCBD1P61457 104 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 HIST1H3AP68431 136 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 PSG4Q00888 419 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 TEKQ02763 1124 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 SCRN3Q0VDG4 424 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 SNAPC1Q16533 368 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 HIST2H3PS2Q5TEC6 136 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 LINC01590Q5TEZ4 76 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 PLBD1Q6P4A8 553 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 BRICD5Q6PL45 260 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 C20orf204Q6ZNR8 217 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 HIST2H3AQ71DI3 136 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 CXXC5Q7LFL8 322 aaKnown RBP6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 CDH24Q86UP0 819 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 PAQR4Q8N4S7 273 aaPredicted RBP6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 ZNF611Q8N823 705 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 CPEB3Q8NE35 698 aaKnown RBP6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 SLC30A7Q8NEW0 376 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 NUP37Q8NFH4 326 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 BBS1Q8NFJ9 593 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 OR51L1Q8NGJ5 315 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 AKR7LQ8NHP1 331 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 IGFBPL1Q8WX77 278 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 AKAP1Q92667 903 aaKnown RBP eCLIP6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 PTP4A1Q93096 173 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 EME1Q96AY2 570 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 PLEKHA8Q96JA3 519 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 MBOAT4Q96T53 435 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 SLC29A1Q99808 456 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 TEX12Q9BXU0 123 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 PRRG3Q9BZD7 231 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 GRIP2Q9C0E4 1043 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 KCNN2Q9H2S1 579 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 C1orf198Q9H425 327 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 RIBC2Q9H4K1 309 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 ST6GALNAC2Q9UJ37 374 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 TIMM10BQ9Y5J6 103 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 ORC6Q9Y5N6 252 aa6.04□□□□□ -1.44
LPCAT3-209ENST00000540060 CCDC168Q8NDH2 2452 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 CHD3Q12873 2000 aaKnown RBP6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 LOC100509620A0A075B734 347 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 IQCMA0A1B0GVH7 501 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 OR6C6A6NF89 314 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 TVP23AA6NH52 213 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 E7EQL1 145 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 CASQ2O14958 399 aaPredicted RBP6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 RER1O15258 196 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 SGCEO43556 437 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 SYNGR3O43761 229 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 DOK2O60496 412 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 ICMTO60725 284 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 GLCEO94923 617 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 PTHP01270 115 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 HLA-DQA2P01906 255 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 RAF1P04049 648 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 DANCRP0C864 163 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 CCL2P13500 99 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 STOMP27105 288 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 FMO3P31513 532 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 APLNRP35414 380 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 RAD23AP54725 363 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 ADAM8P78325 824 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 NKX6-1P78426 367 aaPredicted RBP6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 EFNB1P98172 346 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 HGFACQ04756 655 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 PLP2Q04941 152 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 SNTB2Q13425 540 aaKnown RBP6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 RAB35Q15286 201 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 TRIP10Q15642 601 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 PCK2Q16822 640 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 TBC1D28Q2M2D7 210 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 CCDC92Q53HC0 331 aaPredicted RBP6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 LPCAT4Q643R3 524 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 KRT80Q6KB66 452 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 SLC18B1Q6NT16 456 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 ZNF774Q6NX45 483 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 CFAP77Q6ZQR2 320 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 ZBTB49Q6ZSB9 765 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 VASH1Q7L8A9 365 aaPredicted RBP6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 CPOQ8IVL8 374 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 LINC00346Q8IVM7 164 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 DEPDC4Q8N2C3 294 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 IL17RDQ8NFM7 739 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 OR10H5Q8NGA6 315 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 OR4F15Q8NGB8 312 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 OR6K6Q8NGW6 343 aa6.03□□□□□ -1.44
LPCAT3-209ENST00000540060 TMEM163Q8TC26 289 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms