RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 SMAD9O15198 467 aaKnown RBP15.01□□□□□ -0.01
COPS3-212ENST00000539941 KLK2P20151 261 aa15.01□□□□□ -0.01
COPS3-212ENST00000539941 RFC3P40938 356 aa15.01□□□□□ -0.01
COPS3-212ENST00000539941 SUCLG1P53597 346 aaKnown RBP15.01□□□□□ -0.01
COPS3-212ENST00000539941 CLDN17P56750 224 aa15.01□□□□□ -0.01
COPS3-212ENST00000539941 PPIAP62937 165 aaKnown RBP15.01□□□□□ -0.01
COPS3-212ENST00000539941 ADAM8P78325 824 aa15.01□□□□□ -0.01
COPS3-212ENST00000539941 FABP5Q01469 135 aa15.01□□□□□ -0.01
COPS3-212ENST00000539941 FMODQ06828 376 aa15.01□□□□□ -0.01
COPS3-212ENST00000539941 CAMK2DQ13557 499 aa15.01□□□□□ -0.01
COPS3-212ENST00000539941 CDK5R1Q15078 307 aa15.01□□□□□ -0.01
COPS3-212ENST00000539941 PCK2Q16822 640 aa15.01□□□□□ -0.01
COPS3-212ENST00000539941 GLB1L2Q8IW92 636 aa15.01□□□□□ -0.01
COPS3-212ENST00000539941 MS4A15Q8N5U1 240 aa15.01□□□□□ -0.01
COPS3-212ENST00000539941 UCN2Q96RP3 112 aa15.01□□□□□ -0.01
COPS3-212ENST00000539941 SLC30A2Q9BRI3 323 aa15.01□□□□□ -0.01
COPS3-212ENST00000539941 TTYH2Q9BSA4 534 aa15.01□□□□□ -0.01
COPS3-212ENST00000539941 TMED9Q9BVK6 235 aa15.01□□□□□ -0.01
COPS3-212ENST00000539941 SLC22A4Q9H015 551 aa15.01□□□□□ -0.01
COPS3-212ENST00000539941 KLHDC2Q9Y2U9 406 aa15.01□□□□□ -0.01
COPS3-212ENST00000539941 CXCL13O43927 109 aa15□□□□□ -0.01
COPS3-212ENST00000539941 RGS9O75916 674 aaPredicted RBP15□□□□□ -0.01
COPS3-212ENST00000539941 GPANK1O95872 356 aa15□□□□□ -0.01
COPS3-212ENST00000539941 IL1AP01583 271 aa15□□□□□ -0.01
COPS3-212ENST00000539941 ZNF823P16415 610 aa15□□□□□ -0.01
COPS3-212ENST00000539941 TALDO1P37837 337 aa15□□□□□ -0.01
COPS3-212ENST00000539941 STARP49675 285 aa15□□□□□ -0.01
COPS3-212ENST00000539941 LHX2P50458 406 aa15□□□□□ -0.01
COPS3-212ENST00000539941 FAPQ12884 760 aa15□□□□□ -0.01
COPS3-212ENST00000539941 ABLIM2Q6H8Q1 611 aa15□□□□□ -0.01
COPS3-212ENST00000539941 ARL9Q6T311 187 aa15□□□□□ -0.01
COPS3-212ENST00000539941 PNPLA5Q7Z6Z6 429 aaPredicted RBP15□□□□□ -0.01
COPS3-212ENST00000539941 RPS4Y2Q8TD47 263 aa15□□□□□ -0.01
COPS3-212ENST00000539941 SNAPC3Q92966 411 aa15□□□□□ -0.01
COPS3-212ENST00000539941 PNPLA2Q96AD5 504 aa15□□□□□ -0.01
COPS3-212ENST00000539941 SMIM19Q96E16 107 aa15□□□□□ -0.01
COPS3-212ENST00000539941 MED18Q9BUE0 208 aa15□□□□□ -0.01
COPS3-212ENST00000539941 CDADC1Q9BWV3 514 aa15□□□□□ -0.01
COPS3-212ENST00000539941 TTTY10Q9BZA0 68 aa15□□□□□ -0.01
COPS3-212ENST00000539941 EIF3KQ9UBQ5 218 aaKnown RBP15□□□□□ -0.01
COPS3-212ENST00000539941 APC2O95996 2303 aa15□□□□□ -0.01
COPS3-212ENST00000539941 TRAV17A0A0B4J275 112 aa15□□□□□ -0.01
COPS3-212ENST00000539941 LINC00862A6NCI5 91 aa15□□□□□ -0.01
COPS3-212ENST00000539941 H0YC42 278 aa15□□□□□ -0.01
COPS3-212ENST00000539941 GABRPO00591 440 aa15□□□□□ -0.01
COPS3-212ENST00000539941 KLK10O43240 276 aa15□□□□□ -0.01
COPS3-212ENST00000539941 AQP8O94778 261 aa15□□□□□ -0.01
COPS3-212ENST00000539941 ABHD16AO95870 558 aa15□□□□□ -0.01
COPS3-212ENST00000539941 ACTL6AO96019 429 aa15□□□□□ -0.01
COPS3-212ENST00000539941 CELA3AP09093 270 aa15□□□□□ -0.01
COPS3-212ENST00000539941 ZNF708P17019 499 aa15□□□□□ -0.01
COPS3-212ENST00000539941 EIF1AXP47813 144 aaKnown RBP15□□□□□ -0.01
COPS3-212ENST00000539941 CLDN15P56746 228 aa15□□□□□ -0.01
COPS3-212ENST00000539941 SLC10A1Q14973 349 aa15□□□□□ -0.01
COPS3-212ENST00000539941 C22orf42Q6IC83 251 aa15□□□□□ -0.01
COPS3-212ENST00000539941 KCTD18Q6PI47 426 aaPredicted RBP15□□□□□ -0.01
COPS3-212ENST00000539941 SLC25A47Q6Q0C1 308 aa15□□□□□ -0.01
COPS3-212ENST00000539941 MEIOBQ8N635 442 aa15□□□□□ -0.01
COPS3-212ENST00000539941 SNIP1Q8TAD8 396 aaKnown RBP15□□□□□ -0.01
COPS3-212ENST00000539941 INTS12Q96CB8 462 aaKnown RBP15□□□□□ -0.01
COPS3-212ENST00000539941 PGLYRP3Q96LB9 341 aa15□□□□□ -0.01
COPS3-212ENST00000539941 SMAD5Q99717 465 aaKnown RBP15□□□□□ -0.01
COPS3-212ENST00000539941 MRM2Q9UI43 246 aaKnown RBP15□□□□□ -0.01
COPS3-212ENST00000539941 KCNG2Q9UJ96 466 aa15□□□□□ -0.01
COPS3-212ENST00000539941 RCE1Q9Y256 329 aa15□□□□□ -0.01
COPS3-212ENST00000539941 NBEAQ8NFP9 2946 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 IGHV3-15A0A0B4J1V0 119 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 IGKV1D-43A0A0B4J1Z2 117 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 A0A0G2JMP0 313 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 PRR32B1ATL7 298 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 EFSO43281 561 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 GPRIN2O60269 458 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 SERPINA3P01011 423 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 C1QBP02746 253 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 SPARCP09486 303 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 LAP3P28838 519 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 ZNF133P52736 654 aaPredicted RBP14.99□□□□□ -0.01
COPS3-212ENST00000539941 CLDN18P56856 261 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 ROM1Q03395 351 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 RPTNQ6XPR3 784 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 ZNF782Q6ZMW2 699 aaPredicted RBP14.99□□□□□ -0.01
COPS3-212ENST00000539941 TRILQ7L0X0 811 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 THEM6Q8WUY1 208 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 TMEM54Q969K7 222 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 MCHR2Q969V1 340 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 DMRTB1Q96MA1 342 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 OR2M2Q96R28 347 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 OR8B4Q96RC9 309 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 SLC6A15Q9H2J7 730 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 ZDHHC11Q9H8X9 412 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 AUP1Q9Y679 476 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 ACACAQ13085 2346 aa14.99□□□□□ -0.01
COPS3-212ENST00000539941 URB1O60287 2271 aaKnown RBP14.98□□□□□ -0.01
COPS3-212ENST00000539941 MAGEB4O15481 346 aaPredicted RBP14.98□□□□□ -0.01
COPS3-212ENST00000539941 LRRTM2O43300 516 aa14.98□□□□□ -0.01
COPS3-212ENST00000539941 EDNRAP25101 427 aa14.98□□□□□ -0.01
COPS3-212ENST00000539941 CSNK1A1P48729 337 aa14.98□□□□□ -0.01
COPS3-212ENST00000539941 GZMKP49863 264 aa14.98□□□□□ -0.01
COPS3-212ENST00000539941 GDI2P50395 445 aaKnown RBP14.98□□□□□ -0.01
COPS3-212ENST00000539941 SLC3A1Q07837 685 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms